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scnpilot_p_inoc_scaffold_89_curated

Search features with annotation key words

Displaying items 1-30 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_89_curated_1
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

151..1242
DNA (1092bp) protein (364aa)
Ribose ABC transporter permease n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFJ6_9BACT
inner-membrane translocator; K10440 ribose transport system permease protein
Tax=BJP_IG2157_Actinomycetales_63_19
scnpilot_p_inoc_scaffold_89_curated_2
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1245..2036
DNA (792bp) protein (264aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPN9_9RHIZ
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESX80882.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ABC transporter
scnpilot_p_inoc_scaffold_89_curated_3
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2054..3013
DNA (960bp) protein (320aa)
Ribose ABC transporter substrate-binding protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UVN9_9MICO
Ribose ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAB49797.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
rbsB; ribose ABC transporter; K10439 ribose transport system substrate-binding protein
scnpilot_p_inoc_scaffold_89_curated_4
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3010..3810
DNA (801bp) protein (267aa)
lysophospholipase n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI000360D3DE
Phospholipase ytpA {ECO:0000313|EMBL:CQR60356.1}; TaxID=1437453 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
lipase
scnpilot_p_inoc_scaffold_89_curated_5
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3882..4940
DNA (1059bp) protein (353aa)
Bacterial regulatory s, lacI family protein {ECO:0000313|EMBL:CCQ44500.1}; EC=5.1.1.1 {ECO:0000313|EMBL:CCQ44500.1};; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
LacI family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B40A4A
LacI family transcriptional regulator
scnpilot_p_inoc_scaffold_89_curated_6
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4949..5239
DNA (291bp) protein (97aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B45AB0
Uncharacterized protein {ECO:0000313|EMBL:GAB95896.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hypothetical protein
scnpilot_p_inoc_scaffold_89_curated_7
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5236..6159
DNA (924bp) protein (308aa)
ribokinase-like domain-containing protein; K00847 fructokinase [EC:2.7.1.4]
Sugar kinase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YP97_9MICO
Sugar kinase {ECO:0000313|EMBL:GAD34979.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
scnpilot_p_inoc_scaffold_89_curated_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6413..7660)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=2 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9T2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83325.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transposase, mutator family
scnpilot_p_inoc_scaffold_89_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7711..8184
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KE18_9MICO
Phage-related integrase (Modular protein) {ECO:0000313|EMBL:CDK01657.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
phage-related integrase
scnpilot_p_inoc_scaffold_89_curated_10
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8359..9363
DNA (1005bp) protein (335aa)
LacI family transcription regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B696B4
LacI family transcriptional regulator {ECO:0000313|EMBL:KGM16372.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
transcriptional regulator, LacI family
scnpilot_p_inoc_scaffold_89_curated_11
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9379..10629)
DNA (1251bp) protein (417aa)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BJL8_SANKS
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase {ECO:0000313|EMBL:ACZ20274.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
scnpilot_p_inoc_scaffold_89_curated_12
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10702..11967)
DNA (1266bp) protein (422aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BJM1_SANKS
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ACZ20277.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
scnpilot_p_inoc_scaffold_89_curated_13
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12144..13094
DNA (951bp) protein (317aa)
ABC-type sugar transport systems, permease components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND61_MICTS
Sugar ABC transporter permease {ECO:0000313|EMBL:KJC64604.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein
scnpilot_p_inoc_scaffold_89_curated_14
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13091..13948
DNA (858bp) protein (286aa)
ABC-type sugar transport system, permease component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND62_MICTS
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:KJL30055.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
scnpilot_p_inoc_scaffold_89_curated_15
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13945..15504
DNA (1560bp) protein (520aa)
abfA; alpha-L-arabinofuranosidase; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
alpha-N-arabinofuranosidase n=1 Tax=Microbacterium paraoxydans RepID=UPI00036EE5B6
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:EZP28117.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
scnpilot_p_inoc_scaffold_89_curated_16
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16172..16444)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003470BDF
Uncharacterized protein {ECO:0000313|EMBL:EYT58181.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
scnpilot_p_inoc_scaffold_89_curated_17
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16506..16838)
DNA (333bp) protein (111aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SBU8_GEOOG
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ADB76205.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_p_inoc_scaffold_89_curated_18
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16876..17895)
DNA (1020bp) protein (340aa)
AP endonuclease n=1 Tax=Agromyces subbeticus RepID=UPI0003B4CC64
AP endonuclease {ECO:0000313|EMBL:KHK95895.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
xylose isomerase
scnpilot_p_inoc_scaffold_89_curated_19
Arthrobacter sp. MWB30, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17892..19010)
DNA (1119bp) protein (373aa)
oxidoreductase n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00037A58C7
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:KIA74679.1}; TaxID=1534409 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. MWB30.;"
oxidoreductase domain-containing protein
scnpilot_p_inoc_scaffold_89_curated_20
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19010..19981)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VTV9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD30938.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
monosaccharide ABC transporter membrane protein, CUT2 family; K10440 ribose transport system permease protein
scnpilot_p_inoc_scaffold_89_curated_21
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19978..21495)
DNA (1518bp) protein (506aa)
ABC transporter-like protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
Monosaccharide ABC transporter ATP-binding protein, CUT2 family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JW77_ARTS2
Monosaccharide ABC transporter ATP-binding protein, CUT2 family {ECO:0000313|EMBL:ABK03297.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_p_inoc_scaffold_89_curated_22
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21488..22666)
DNA (1179bp) protein (393aa)
Oxidoreductase domain protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JW73_ARTS2
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABK03293.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_p_inoc_scaffold_89_curated_23
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22761..23921)
DNA (1161bp) protein (387aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M429_ARTPP
monosaccharide ABC transporter substrate-binding protein, CUT2 family; K10439 ribose transport system substrate-binding protein
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:ADX72252.1}; Flags: Precursor;; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
scnpilot_p_inoc_scaffold_89_curated_24
Burkholderia sp. 2385, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24012..24836)
DNA (825bp) protein (275aa)
xylose isomerase domain-containing protein; K03335 inosose dehydratase [EC:4.2.1.44]
Inosose dehydratase n=1 Tax=Paenibacillus sp. P22 RepID=T2LSZ2_9BACL
Sugar phosphate isomerase {ECO:0000313|EMBL:KIK83491.1}; TaxID=1219709 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 2385.;"
scnpilot_p_inoc_scaffold_89_curated_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25029..26111
DNA (1083bp) protein (361aa)
ROK family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B40ED7
ROK family protein {ECO:0000313|EMBL:ERK70184.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ROK family transcriptional regulator rbh
scnpilot_p_inoc_scaffold_89_curated_26
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26285..26545)
DNA (261bp) protein (87aa)
NAD(P)H-binding protein, PF13460 family n=1 Tax=Olsenella profusa F0195 RepID=U2UST5_9ACTN
NAD(P)H-binding protein, PF13460 family {ECO:0000313|EMBL:ERL06177.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
nucleoside-diphosphate-sugar epimerase
scnpilot_p_inoc_scaffold_89_curated_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26547..26948
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000376192E
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
response regulator receiver and unknown domain-containing protein
scnpilot_p_inoc_scaffold_89_curated_28
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27018..28250
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6K3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07289.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_89_curated_29
unknown

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comp(28256..28408)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_89_curated_30
unknown

Not on your lists

comp(28542..28871)
DNA (330bp) protein (110aa)

This feature has no annotations

Displaying items 1-30 of 221 in total

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