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scnpilot_p_inoc_scaffold_835_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_835_curated_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..1357
DNA (1356bp) protein (452aa)
ATPase AAA-2 domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5C3_9MICO
ATPase AAA-2 domain protein {ECO:0000313|EMBL:EIC08062.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
clpC; ATPase with chaperone activity, ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
scnpilot_p_inoc_scaffold_835_curated_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1649..2611)
DNA (963bp) protein (321aa)
IPT/TIG domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMC8_LEIAQ
IPT/TIG domain protein {ECO:0000313|EMBL:ERK69981.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_p_inoc_scaffold_835_curated_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2654..3694)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348563F
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAJ73174.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_835_curated_4
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3807..4691)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00037E2D91
Putative cysteine protease {ECO:0000313|EMBL:EZP28410.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_835_curated_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4688..7201)
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5C0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08059.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_835_curated_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7198..10539)
DNA (3342bp) protein (1114aa)
Transglutaminase family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UMX2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJL38317.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transglutaminase
scnpilot_p_inoc_scaffold_835_curated_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10603..11103
DNA (501bp) protein (167aa)
N-acetylglutamate synthase; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1]
GCN5-related N-acetyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5B9_9MICO
N-acetylglutamate synthase {ECO:0000313|EMBL:KIC59450.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_835_curated_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11224..11868
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E5B8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08057.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_835_curated_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12225..12626
DNA (402bp) protein (134aa)
Anaerobic dehydrogenase, typically selenocysteine-containing n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5B7_9MICO
Dehydrogenase {ECO:0000313|EMBL:KIC59449.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
anaerobic dehydrogenase, typically selenocysteine-containing
scnpilot_p_inoc_scaffold_835_curated_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12791..14152)
DNA (1362bp) protein (454aa)
DNA repair protein radA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACG1_9MICO
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
radA; ATP-dependent serine protease; K04485 DNA repair protein RadA/Sms
scnpilot_p_inoc_scaffold_835_curated_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14254..15207)
DNA (954bp) protein (318aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
malate/lactate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27]
L-lactate dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AH22_9MICO
scnpilot_p_inoc_scaffold_835_curated_12
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15281..16498)
DNA (1218bp) protein (406aa)
Phosphonate catabolism associated alcohol dehydrogenase id=7720545 bin=CNBR_ACT species=Beutenbergia cavernae genus=Beutenbergia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03401.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
phosphonate catabolism associated alcohol dehydrogenase
scnpilot_p_inoc_scaffold_835_curated_13
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16495..17172)
DNA (678bp) protein (226aa)
Putative hydrolase id=7720544 bin=CNBR_ACT species=Kitasatospora setae genus=Kitasatospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
haloacid dehalogenase-like hydrolase family protein
Haloacid dehalogenase-like hydrolase family protein {ECO:0000313|EMBL:AFR10415.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
scnpilot_p_inoc_scaffold_835_curated_14
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17202..18281)
DNA (1080bp) protein (360aa)
Putative oxidoreductase id=7720543 bin=CNBR_ACT species=Rhodococcus opacus genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
phytoene dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AGW42613.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_p_inoc_scaffold_835_curated_15
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18288..20129)
DNA (1842bp) protein (614aa)
Phosphonate ABC transporter permease protein id=7720542 bin=CNBR_ACT species=Gordonia amicalis genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03374.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
binding-protein-dependent transport system inner membrane protein; K02042 phosphonate transport system permease protein
scnpilot_p_inoc_scaffold_835_curated_16
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20129..21067)
DNA (939bp) protein (313aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
phosphonate ABC transporter ATPase; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
Phosphonate ABC transporter, ATPase subunit id=7720541 bin=CNBR_ACT species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
scnpilot_p_inoc_scaffold_835_curated_17
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21093..22043)
DNA (951bp) protein (317aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA07007.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Phosphonate ABC transporter, periplasmic phosphonate-binding protein id=7720540 bin=CNBR_ACT species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
phnD; putative phosphonate ABC transporter substrate-binding protein; K02044 phosphonate transport system substrate-binding protein
scnpilot_p_inoc_scaffold_835_curated_18
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

22403..23299
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034608EE
DMT family permease
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_p_inoc_scaffold_835_curated_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23296..24246
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI00037C93DF
HAD superfamily hydrolase
Hydrolase of the HAD superfamily {ECO:0000313|EMBL:CAR86926.1}; Putative hydrolase {ECO:0000313|EMBL:BAI41512.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
scnpilot_p_inoc_scaffold_835_curated_20
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24629..26236)
DNA (1608bp) protein (536aa)
Putative two-component system histidine kinase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJW2_MICPN
putative two-component system histidine kinase
Putative two-component system histidine kinase {ECO:0000313|EMBL:BAK33458.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_p_inoc_scaffold_835_curated_21
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26233..26877)
DNA (645bp) protein (215aa)
Two-component system response regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJW1_MICPN
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:BAK33457.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_p_inoc_scaffold_835_curated_22
unknown

Not on your lists

27056..27454
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_835_curated_23
Arthrobacter sp. 31-32, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27629..28237)
DNA (609bp) protein (203aa)
Resolvase n=1 Tax=Arthrobacter sp. 31-32 RepID=I3VZE0_9MICC
Resolvase {ECO:0000313|EMBL:AFK88717.1}; TaxID=1179816 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 31-32.;"
resolvase
scnpilot_p_inoc_scaffold_835_curated_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28455..29024)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABP6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86563.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_835_curated_25
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29110..29514)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BD30_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86564.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_835_curated_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29636..30067
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIE6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86565.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_835_curated_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30149..30754
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE47_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86566.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_835_curated_28
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30911..33061
DNA (2151bp) protein (717aa)
copper/silver-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWW7_9MICO
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EPD86567.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_835_curated_29
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(33401..33790)
DNA (390bp) protein (130aa)
Transcriptional regulator, MerR family n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XPU8_9CORY
transcriptional regulator
Tax=BJP_IG2157_Actinomycetales_63_19
scnpilot_p_inoc_scaffold_835_curated_30
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

33890..35266
DNA (1377bp) protein (459aa)
mercuric reductase; K00520 mercuric reductase [EC:1.16.1.1]
mercuric reductase n=1 Tax=Agrococcus pavilionensis RepID=UPI000390A1D9
Tax=BJP_IG2157_Actinomycetales_63_19
Displaying items 1-30 of 35 in total

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