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scnpilot_p_inoc_scaffold_200_curated

Search features with annotation key words

Displaying items 1-30 of 265 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_200_curated_1
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..220
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Actinomycetales RepID=D0LBE4_GORB4
hypothetical protein
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KGN29393.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
scnpilot_p_inoc_scaffold_200_curated_2
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(395..904)
DNA (510bp) protein (170aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MBG6_BRAFD
Uncharacterized protein {ECO:0000313|EMBL:KJL27045.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
acetyltransferase, ribosomal protein N-acetylase
scnpilot_p_inoc_scaffold_200_curated_3
unknown

Not on your lists

comp(993..1472)
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_200_curated_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1485..2555)
DNA (1071bp) protein (357aa)
Ribosome-binding ATPase YchF n=2 Tax=Microbacterium RepID=H8E7P2_9MICO
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
GTPase, probable translation factor; K06942
scnpilot_p_inoc_scaffold_200_curated_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2602..3342)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9R6_9MICO
SAM-dependent methlyltransferase {ECO:0000313|EMBL:EXJ53068.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SAM-dependent methyltransferase
scnpilot_p_inoc_scaffold_200_curated_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3485..4558
DNA (1074bp) protein (358aa)
Alcohol dehydrogenase, propanol-preferring n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A864_9MICO
Alcohol dehydrogenase, propanol-preferring {ECO:0000313|EMBL:EPD85358.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Zn-dependent alcohol dehydrogenase
scnpilot_p_inoc_scaffold_200_curated_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4561..5283
DNA (723bp) protein (241aa)
DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Exonuclease RNase T and DNA polymerase III n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7N6_9MICO
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:EIC07227.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_200_curated_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5339..6598
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA84_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85356.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K09760 DNA recombination protein RmuC
scnpilot_p_inoc_scaffold_200_curated_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6625..6816)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E7N4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07225.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
scnpilot_p_inoc_scaffold_200_curated_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6977..7966)
DNA (990bp) protein (330aa)
glpX; fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase; K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11]
Fructose-1,6-bisphosphatase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7N3_9MICO
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_200_curated_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8188..9219
DNA (1032bp) protein (344aa)
fba; fructose/tagatose bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Fructose-bisphosphate aldolase, class II n=2 Tax=Microbacterium RepID=H8E7N2_9MICO
Fructose-bisphosphate aldolase, class II {ECO:0000313|EMBL:EPD85353.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_200_curated_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9344..9922)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA80_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60271.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_200_curated_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9919..10842)
DNA (924bp) protein (308aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ispH; penicillin tolerance protein; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF68_9MICO
scnpilot_p_inoc_scaffold_200_curated_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11057..12331
DNA (1275bp) protein (425aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
exonuclease VII, large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 large subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9Q5_9MICO
scnpilot_p_inoc_scaffold_200_curated_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12401..12631
DNA (231bp) protein (77aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
xseB; exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit n=2 Tax=Microbacterium RepID=H8E7M7_9MICO
scnpilot_p_inoc_scaffold_200_curated_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12654..13280
DNA (627bp) protein (209aa)
Amino acid transporter n=2 Tax=Microbacterium RepID=H8E7M6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53058.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
amino acid transporters
scnpilot_p_inoc_scaffold_200_curated_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13277..13930
DNA (654bp) protein (218aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
cynT; carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=2 Tax=Microbacterium RepID=H8E7M5_9MICO
scnpilot_p_inoc_scaffold_200_curated_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13965..15362
DNA (1398bp) protein (466aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
fumC; fumarase; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=2 Tax=Microbacterium RepID=H8E7M4_9MICO
scnpilot_p_inoc_scaffold_200_curated_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15373..16359
DNA (987bp) protein (329aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ATP-binding region ATPase domain protein n=2 Tax=Microbacterium RepID=H8E7M3_9MICO
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_200_curated_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16356..17012
DNA (657bp) protein (219aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7M2_9MICO
Transcriptional regulator {ECO:0000313|EMBL:EXJ53054.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
scnpilot_p_inoc_scaffold_200_curated_21
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17031..18380)
DNA (1350bp) protein (450aa)
phosphate starvation protein PhoH n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F9334
ATP-binding protein {ECO:0000313|EMBL:KIC60264.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
phoH; ATPase; K07175 PhoH-like ATPase
scnpilot_p_inoc_scaffold_200_curated_22
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18545..19924)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA75_9MICO
Aminotransferase class V {ECO:0000313|EMBL:KIC60263.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_200_curated_23
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19942..20727)
DNA (786bp) protein (262aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
uppS; undecaprenyl pyrophosphate synthase; K12503 short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
Isoprenyl transferase n=2 Tax=Microbacterium RepID=H8E7L9_9MICO
scnpilot_p_inoc_scaffold_200_curated_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20822..21559
DNA (738bp) protein (246aa)
DNA-binding protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000368C4DF
Hly-III family protein {ECO:0000313|EMBL:EIC07209.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
membrane protein, hemolysin III homolog; K11068 hemolysin III
scnpilot_p_inoc_scaffold_200_curated_25
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21564..21908)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E7L7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60261.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_200_curated_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22047..22457
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AT97_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85337.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_200_curated_27
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22535..23023
DNA (489bp) protein (163aa)
Transcription elongation factor GreA n=2 Tax=Microbacterium RepID=H8E7L5_9MICO
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcription elongation factor; K03624 transcription elongation factor GreA
scnpilot_p_inoc_scaffold_200_curated_28
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23226..24452)
DNA (1227bp) protein (409aa)
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=2 Tax=Microbacterium RepID=H8E7L4_9MICO
Threonine ammonia-lyase {ECO:0000313|EMBL:EPD85335.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_200_curated_29
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24449..25648)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7L3_9MICO
AI-E2 family membrane protein {ECO:0000313|EMBL:EXJ53045.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease
scnpilot_p_inoc_scaffold_200_curated_30
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25741..26628)
DNA (888bp) protein (296aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
protease HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] rbh
Protease HtpX homolog n=2 Tax=Microbacterium RepID=H8E7L2_9MICO
Displaying items 1-30 of 265 in total

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