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SCNpilot_cont_300_bf_scaffold_6546_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6546_curated_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..596
DNA (594bp) protein (198aa)
Protein translocase subunit SecY n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF15_MICTS
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
SCNpilot_cont_300_bf_scaffold_6546_curated_2
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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593..1291
DNA (699bp) protein (233aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbac
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
adenylate kinase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00035C3E81
SCNpilot_cont_300_bf_scaffold_6546_curated_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1293..2126
DNA (834bp) protein (278aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
methionine aminopeptidase n=1 Tax=Microbacterium yannicii RepID=UPI0003009545
SCNpilot_cont_300_bf_scaffold_6546_curated_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2160..2852
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABD6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53155.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
protein-disulfide isomerase
SCNpilot_cont_300_bf_scaffold_6546_curated_5
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3131..3352
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=2 Tax=Microbacterium RepID=T5KGK1_9MICO
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
infA; translation initiation factor 1 (IF-1); K02518 translation initiation factor IF-1
SCNpilot_cont_300_bf_scaffold_6546_curated_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3419..3535
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=3 Tax=Microbacterium RepID=H8E500_9MICO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rpmJ; 50S ribosomal protein L36
SCNpilot_cont_300_bf_scaffold_6546_curated_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3690..4070
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=2 Tax=Microbacterium RepID=H8E4Z9_9MICO
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rpsM; ribosomal protein S13; K02952 small subunit ribosomal protein S13
SCNpilot_cont_300_bf_scaffold_6546_curated_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4103..4501
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Microbacterium sp. TS-1 RepID=U2YP92_9MICO
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rpsK; ribosomal protein S11; K02948 small subunit ribosomal protein S11
SCNpilot_cont_300_bf_scaffold_6546_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4666..5655
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Microbacterium sp. B19 RepID=UPI000345F016
SCNpilot_cont_300_bf_scaffold_6546_curated_10
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5691..6257
DNA (567bp) protein (189aa)
50S ribosomal protein L17 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FC0E5
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
rplQ; ribosomal protein L17; K02879 large subunit ribosomal protein L17
SCNpilot_cont_300_bf_scaffold_6546_curated_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6320..7114)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4C3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX16457.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
Displaying 11 items

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