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SCNpilot_cont_300_bf_scaffold_9074_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_9074_curated_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..254
DNA (252bp) protein (84aa)
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; K00151 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:KHL00084.1}; EC=1.2.1.8 {ECO:0000313|EMBL:KHL00084.1};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
betaine-aldehyde dehydrogenase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5044A
SCNpilot_cont_300_bf_scaffold_9074_curated_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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285..1448
DNA (1164bp) protein (388aa)
bphC; manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase BphC (EC:1.13.11.39)
Putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WC41_9ACTO
3,4-dihydroxyphenylacetate 2,3-dioxygenase {ECO:0000313|EMBL:KHL00083.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_cont_300_bf_scaffold_9074_curated_3
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1487..2272
DNA (786bp) protein (262aa)
2-hydroxyhexa-2,4-dienoate hydratase {ECO:0000313|EMBL:KJL26268.1}; EC=4.2.1.132 {ECO:0000313|EMBL:KJL26268.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
2-keto-4-pentenoate hydratase; K02509 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
2-oxo-hept-3-ene-1,7-dioate hydratase n=1 Tax=Microbacterium yannicii RepID=UPI0002DAA8C1
SCNpilot_cont_300_bf_scaffold_9074_curated_4
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2257..3063
DNA (807bp) protein (269aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
alpha-dehydro-beta-deoxy-D-glucarate aldolase n=1 Tax=Humibacter albus RepID=UPI0003B36976
Alpha-dehydro-beta-deoxy-D-glucarate aldolase {ECO:0000313|EMBL:EWT05440.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
SCNpilot_cont_300_bf_scaffold_9074_curated_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3167..3706
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379374C
Uncharacterized protein {ECO:0000313|EMBL:CDJ99213.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_9074_curated_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3777..4163
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F02362
YCII-related domain protein {ECO:0000313|EMBL:KJL35177.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
YCII-like protein
SCNpilot_cont_300_bf_scaffold_9074_curated_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4160..5191
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362D83A
RNA polymerase sigma factor {ECO:0000313|EMBL:KJL35178.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_300_bf_scaffold_9074_curated_8
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5545..6429)
DNA (885bp) protein (295aa)
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035CB6B9
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCNpilot_cont_300_bf_scaffold_9074_curated_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6522..7796)
DNA (1275bp) protein (425aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
glyA; glycine/serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
serine hydroxymethyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B29D5
SCNpilot_cont_300_bf_scaffold_9074_curated_10
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7988..8473
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037436B0
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:EZP26164.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_cont_300_bf_scaffold_9074_curated_11
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8470..8958
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030AFCD1
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:EZP26164.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
beta-N-acetylhexosaminidase
Displaying 11 items

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