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SCNpilot_cont_300_bf_scaffold_3809_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3809_curated_1
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..434
DNA (432bp) protein (144aa)
DNA polymerase III subunit alpha {ECO:0000313|EMBL:KJL22660.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KJL22660.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
dnaE; DNA polymerase III, alpha subunit; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III subunit alpha n=1 Tax=Microbacterium barkeri RepID=UPI0002F9782A
SCNpilot_cont_300_bf_scaffold_3809_curated_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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499..1473
DNA (975bp) protein (325aa)
AAA ATPase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XJP2_9MICO
AAA ATPase {ECO:0000313|EMBL:GAD33385.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3809_curated_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1516..2841
DNA (1326bp) protein (442aa)
hisD; histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
histidinol dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003637769
SCNpilot_cont_300_bf_scaffold_3809_curated_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2854..3324
DNA (471bp) protein (157aa)
Transcriptional repressor NrdR n=2 Tax=Microbacterium RepID=H8E2N4_9MICO
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
nrdR; transcriptional regulator; K07738 transcriptional repressor NrdR
SCNpilot_cont_300_bf_scaffold_3809_curated_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3348..4391
DNA (1044bp) protein (348aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
pyrD; dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
diguanylate cyclase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037161E2
SCNpilot_cont_300_bf_scaffold_3809_curated_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4410..4970)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2X7H6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD33381.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3809_curated_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5017..6360
DNA (1344bp) protein (448aa)
Acetylornithinedeacetylase/Succinyl-diaminopimelate desuccinylase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XJN8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KHK96909.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
SCNpilot_cont_300_bf_scaffold_3809_curated_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6431..6796
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377CA9A
Iron-sulfur cluster insertion protein ErpA {ECO:0000313|EMBL:KJL36965.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3809_curated_9
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6957..7850
DNA (894bp) protein (298aa)
heme/copper-type cytochrome/quinol oxidase, subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
cytochrome C oxidase subunit II n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380305E
Cytochrome C oxidase subunit II {ECO:0000313|EMBL:KHK96907.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_cont_300_bf_scaffold_3809_curated_10
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7852..9624
DNA (1773bp) protein (591aa)
heme/copper-type cytochrome/quinol oxidase, subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
cytochrome C oxidase subunit I n=1 Tax=Microbacterium yannicii RepID=UPI0002DB9688
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:KEP75227.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_cont_300_bf_scaffold_3809_curated_11
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9625..10059
DNA (435bp) protein (145aa)
Cytochrome c oxidase polypeptide 4 {ECO:0000256|PIRNR:PIRNR017385}; EC=1.9.3.1 {ECO:0000256|PIRNR:PIRNR017385};; Cytochrome aa3 subunit 4 {ECO:0000256|PIRNR:PIRNR017385}; Cytochrome c oxidase polypeptide IV {ECO:0000256|PIRNR:PIRNR017385}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C593C
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3809_curated_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10067..10852
DNA (786bp) protein (262aa)
Serine/threonine protein phosphatase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N825_MICTS
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:BAJ73045.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_300_bf_scaffold_3809_curated_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10859..11266)
DNA (408bp) protein (136aa)
Thiosulfate sulfurtransferase GlpE {ECO:0000313|EMBL:KJL36970.1}; EC=2.8.1.1 {ECO:0000313|EMBL:KJL36970.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sulfurtransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B3C534
rhodanese-related sulfurtransferase
SCNpilot_cont_300_bf_scaffold_3809_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11432..11704)
DNA (273bp) protein (91aa)
menaquinol-cytochrome C reductase cytochrome b subunit n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003667E6C
Ubiquinol-cytochrome c reductase cytochrome b subunit {ECO:0000313|EMBL:CDK01296.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
qcrB; cytochrome b subunit of the bc complex; K03891 ubiquinol-cytochrome c reductase cytochrome b subunit
Displaying 14 items

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