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SCNpilot_cont_300_bf_scaffold_1071_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1071_curated_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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52..645
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2F8_LEIAQ
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK71668.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1071_curated_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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706..2439
DNA (1734bp) protein (578aa)
Pyruvate dehydrogenase (Pyruvate oxidase),thiamin-dependent, FAD-binding {ECO:0000313|EMBL:CDK01755.1}; EC=1.2.3.3 {ECO:0000313|EMBL:CDK01755.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
pyruvate dehydrogenase (EC:1.2.5.1); K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
pyruvate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000368A383
SCNpilot_cont_300_bf_scaffold_1071_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2809..3939)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003098B30
Integrase family protein (Modular protein) {ECO:0000313|EMBL:CDK00607.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
phage-related integrase rbh
SCNpilot_cont_300_bf_scaffold_1071_curated_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4883..5209)
DNA (327bp) protein (109aa)
Very short patch repair protein {ECO:0000313|EMBL:KJQ54398.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJQ54398.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
putative patch repair endonuclease; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI000369B0A7
SCNpilot_cont_300_bf_scaffold_1071_curated_5
unknown

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5534..5629
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1071_curated_6
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6079..6981)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Brachybacterium muris RepID=UPI00036714E0
Uncharacterized protein {ECO:0000313|EMBL:EWS82469.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
SCNpilot_cont_300_bf_scaffold_1071_curated_7
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6968..8866)
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Brachybacterium muris RepID=UPI0003498ABA
MerR family transcriptional regulator {ECO:0000313|EMBL:EWS82323.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1071_curated_8
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8863..9834)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Brachybacterium muris RepID=UPI00035DF9E9
Uncharacterized protein {ECO:0000313|EMBL:EWS82468.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
SCNpilot_cont_300_bf_scaffold_1071_curated_9
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9831..12551)
DNA (2721bp) protein (907aa)
hypothetical protein n=1 Tax=Brachybacterium muris RepID=UPI00037DD0E8
Uncharacterized protein {ECO:0000313|EMBL:EWS82467.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1071_curated_10
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12647..13747)
DNA (1101bp) protein (367aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
DNA-cytosine methyltransferase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Cytosine-specific methyltransferase n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LBB8_9MICO
SCNpilot_cont_300_bf_scaffold_1071_curated_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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14266..15162
DNA (897bp) protein (299aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK00541.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_cont_300_bf_scaffold_1071_curated_12
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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15159..17003
DNA (1845bp) protein (615aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003095DD8
Contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ11742.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.;"
Displaying 12 items

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