ggKbase home page

SCNpilot_cont_300_bf_scaffold_1805_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1805_curated_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..334)
DNA (333bp) protein (111aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
clpP2; protease subunit of ATP-dependent Clp protease; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380C493
SCNpilot_cont_300_bf_scaffold_1805_curated_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(365..949)
DNA (585bp) protein (195aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
clpP; protease subunit of ATP-dependent Clp protease; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease ClpP n=1 Tax=Microbacterium yannicii RepID=UPI00031BD273
SCNpilot_cont_300_bf_scaffold_1805_curated_3
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1091..2512)
DNA (1422bp) protein (474aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
trigger factor n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A93DE
tig; FKBP-type peptidyl-prolyl cis-trans isomerase; K03545 trigger factor
SCNpilot_cont_300_bf_scaffold_1805_curated_4
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2788..3564
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI000305A4FA
Uncharacterized protein {ECO:0000313|EMBL:AHF11371.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1805_curated_5
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3564..4139
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0003109540
Uncharacterized protein {ECO:0000313|EMBL:AHF11370.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1805_curated_6
unknown

Not on your lists

4208..5119
DNA (912bp) protein (304aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1805_curated_7
Gordonia alkanivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5116..5343)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000376034A
Putative phage integrase family protein {ECO:0000313|EMBL:GAA11013.1}; TaxID=1027371 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia alkanivorans NBRC 16433.;"
phage integrase family protein
SCNpilot_cont_300_bf_scaffold_1805_curated_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5396..6106)
DNA (711bp) protein (237aa)
Transposase n=1 Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NKH4_KYTSD
Integrase core domain protein {ECO:0000313|EMBL:KJL36675.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transposase
SCNpilot_cont_300_bf_scaffold_1805_curated_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6346..6555)
DNA (210bp) protein (70aa)
Transposase ISMsm7 n=1 Tax=Mycobacterium avium subsp. hominissuis 10-5606 RepID=V7MKQ9_MYCAV
Transposase {ECO:0000313|EMBL:KJL36676.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transposase
SCNpilot_cont_300_bf_scaffold_1805_curated_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6611..7267)
DNA (657bp) protein (219aa)
Putative NTP pyrophosphohydrolases n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B665_9MICO
NTP pyrophosphohydrolase {ECO:0000313|EMBL:AJW77930.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
putative NTP pyrophosphohydrolases
SCNpilot_cont_300_bf_scaffold_1805_curated_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8336..8959
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XC43_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL36794.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1805_curated_12
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9214..9573)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BBDC1
Uncharacterized protein {ECO:0000313|EMBL:KEP75891.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1805_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9575..10111)
DNA (537bp) protein (179aa)
anhydrase n=1 Tax=Microbacterium yannicii RepID=UPI0002F56CB9
Uncharacterized protein {ECO:0000313|EMBL:CDK00829.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
carbonic anhydrase/acetyltransferase, isoleucine patch superfamily
SCNpilot_cont_300_bf_scaffold_1805_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10140..12071)
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373821F
Acyltransferase 3 {ECO:0000313|EMBL:CDK00828.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
acyltransferase 3
Displaying 14 items

View Taxonomy