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SCNpilot_cont_300_bf_scaffold_514_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_514_curated_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_514_curated_2
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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133..807
DNA (675bp) protein (225aa)
Putative hydrolase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1ASN2_RHOOB
Putative hydrolase {ECO:0000313|EMBL:KJV02323.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
hydrolase
SCNpilot_cont_300_bf_scaffold_514_curated_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(815..1789)
DNA (975bp) protein (325aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Microbacterium yannicii RepID=UPI000303B078
5,10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KHK98595.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
SCNpilot_cont_300_bf_scaffold_514_curated_4
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1918..3108)
DNA (1191bp) protein (397aa)
ABC transporter, permease protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7VYR7_9MICO
Major facilitator transporter {ECO:0000313|EMBL:KHK98557.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative MFS permease
SCNpilot_cont_300_bf_scaffold_514_curated_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3149..4219)
DNA (1071bp) protein (357aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV49_LEIAQ
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:ERK72414.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphoglycerate dehydrogenase
SCNpilot_cont_300_bf_scaffold_514_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4319..5230
DNA (912bp) protein (304aa)
aminoglycoside N(3')-acetyltransferase; K00662 aminoglycoside N3'-acetyltransferase [EC:2.3.1.81]
hypothetical protein n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI0003662044
Aminoglycoside 3-N-acetyltransferase {ECO:0000313|EMBL:AHG88626.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCNpilot_cont_300_bf_scaffold_514_curated_7
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5230..6201
DNA (972bp) protein (324aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
PfkB domain protein n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SY23_MICAI
2-keto-3-deoxygluconate kinase {ECO:0000313|EMBL:EWM63357.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
SCNpilot_cont_300_bf_scaffold_514_curated_8
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6198..6812
DNA (615bp) protein (205aa)
2-keto-3-deoxy-phosphogluconate aldolase (EC:4.1.2.14); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI000303721C
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EFL23128.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
SCNpilot_cont_300_bf_scaffold_514_curated_9
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6809..7960
DNA (1152bp) protein (384aa)
galactonate dehydratase; K01684 galactonate dehydratase [EC:4.2.1.6]
galactonate dehydratase n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00037EEF1E
Galactonate dehydratase {ECO:0000313|EMBL:KIC68788.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
SCNpilot_cont_300_bf_scaffold_514_curated_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(7973..9985)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IRC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42824.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_514_curated_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9982..11418)
DNA (1437bp) protein (479aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67555.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_514_curated_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11448..12377)
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67557.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
aldo/keto reductase
SCNpilot_cont_300_bf_scaffold_514_curated_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(12374..13267)
DNA (894bp) protein (298aa)
putative N-acetylneuraminate lyase (EC:4.1.3.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J1B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42821.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
SCNpilot_cont_300_bf_scaffold_514_curated_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13264..14517)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67559.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
wecE; pyridoxal phosphate-dependent aminotransferase rbh
SCNpilot_cont_300_bf_scaffold_514_curated_15

Not on your lists

comp(14514..15752)
DNA (1239bp) protein (413aa)
Marine sediment metagenome DNA, contig: S01H1_L04973 {ECO:0000313|EMBL:GAF73840.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glycosyl hydrolase family 32 id=3822631 bin=GWF2_Lentisphaerae_49_21 species=Alistipes sp. HGB5 genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
SCNpilot_cont_300_bf_scaffold_514_curated_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15817..17493)
DNA (1677bp) protein (559aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67560.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
SCNpilot_cont_300_bf_scaffold_514_curated_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17615..18556)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40418.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
CUT1 family carbohydrate ABC transporter membrane protein 2; K02026 multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_514_curated_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18556..19566)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67562.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_514_curated_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19739..21523
DNA (1785bp) protein (595aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67556.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
SCNpilot_cont_300_bf_scaffold_514_curated_20
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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21520..22704
DNA (1185bp) protein (395aa)
Putative oxidoreductase YteT {ECO:0000313|EMBL:KJL25507.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL25507.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Oxidoreductase domain protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PPH7_KRIFD
oxidoreductase domain-containing protein
SCNpilot_cont_300_bf_scaffold_514_curated_21
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22814..23602
DNA (789bp) protein (263aa)
alkaline phosphatase n=1 Tax=Microbacteriaceae RepID=UPI00036602D5
DeoR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AGW40779.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_300_bf_scaffold_514_curated_22
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23887..24759
DNA (873bp) protein (291aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000313|EMBL:KJL32039.1}; EC=2.6.1.16 {ECO:0000313|EMBL:KJL32039.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
sugar isomerase n=1 Tax=Agromyces subbeticus RepID=UPI0003B3AC52
SIS (sugar ISomerase) domain-containing protein
SCNpilot_cont_300_bf_scaffold_514_curated_23
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24756..25727
DNA (972bp) protein (324aa)
glucokinase n=1 Tax=Agromyces subbeticus RepID=UPI0003B5B28F
sugar kinase
Uncharacterized protein {ECO:0000313|EMBL:AGW40781.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_300_bf_scaffold_514_curated_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25724..26644
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000313|EMBL:KJL25214.1}; EC=2.7.1.144 {ECO:0000313|EMBL:KJL25214.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003459E2E
PfkB domain-containing protein
SCNpilot_cont_300_bf_scaffold_514_curated_25
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26632..27483
DNA (852bp) protein (284aa)
Putative fructose-bisphosphate aldolase {ECO:0000313|EMBL:KJL32042.1}; EC=4.1.2.13 {ECO:0000313|EMBL:KJL32042.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
agaY; tagatose-bisphosphate aldolase; K01636 [EC:4.1.2.-] rbh
Tagatose-bisphosphate aldolase n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AD90_LEIXX
SCNpilot_cont_300_bf_scaffold_514_curated_26
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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27476..28600
DNA (1125bp) protein (375aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000366783C
N-acetylglucosamine-6-phosphate deacetylase
SCNpilot_cont_300_bf_scaffold_514_curated_27
unknown

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comp(28630..29133)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_514_curated_28
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(29130..29966)
DNA (837bp) protein (279aa)
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CI49_THET1
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ACZ43420.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_300_bf_scaffold_514_curated_29
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(29994..31775)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42788.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
SCNpilot_cont_300_bf_scaffold_514_curated_30
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(31772..33301)
DNA (1530bp) protein (510aa)
lat; L-lysine aminotransferase (EC:2.6.1.36); K03918 L-lysine 6-transaminase [EC:2.6.1.36]
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42808.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Displaying items 1-30 of 42 in total

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