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SCNpilot_cont_300_bf_scaffold_3045_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3045_curated_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..362)
DNA (360bp) protein (120aa)
Putative ribonuclease J {ECO:0000313|EMBL:KJL36331.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJL36331.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hydrolase of the metallo-beta-lactamase superfamily; K12574 ribonuclease J [EC:3.1.-.-]
ribonuclease n=1 Tax=Microbacterium yannicii RepID=UPI00030F2241
SCNpilot_cont_300_bf_scaffold_3045_curated_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(432..1409)
DNA (978bp) protein (326aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
dihydrodipicolinate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E12D1
SCNpilot_cont_300_bf_scaffold_3045_curated_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1459..2226)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003665251
Short-chain dehydrogenase {ECO:0000313|EMBL:KHK96173.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
short-chain dehydrogenase of various substrate specificities; K07124
SCNpilot_cont_300_bf_scaffold_3045_curated_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2271..2804)
DNA (534bp) protein (178aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FF4264
SCNpilot_cont_300_bf_scaffold_3045_curated_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2801..3613)
DNA (813bp) protein (271aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
thyA; thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9N4_MICTS
SCNpilot_cont_300_bf_scaffold_3045_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3709..4146
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FC8F6F
Thiol-disulfide isomerase or thioredoxin {ECO:0000313|EMBL:CDK01242.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
thiol-disulfide isomerase and thioredoxins
SCNpilot_cont_300_bf_scaffold_3045_curated_7
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4249..4674
DNA (426bp) protein (142aa)
Osmotically inducible protein OsmC n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXW4_9MICO
Osmotically inducible protein OsmC {ECO:0000313|EMBL:EZP25324.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
redox protein, regulator of disulfide bond formation; K04063 osmotically inducible protein OsmC
SCNpilot_cont_300_bf_scaffold_3045_curated_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4706..5611
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D898DD
nucleoside-diphosphate sugar epimerase; K07071
Predicted nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:BAJ73285.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_300_bf_scaffold_3045_curated_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5604..7253)
DNA (1650bp) protein (550aa)
3-phytase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B332DD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP78915.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_300_bf_scaffold_3045_curated_10
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7380..7832)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035DE31C
Uncharacterized protein {ECO:0000313|EMBL:KHK96178.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3045_curated_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7829..8641)
DNA (813bp) protein (271aa)
dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
dihydrodipicolinate reductase n=1 Tax=Microbacterium yannicii RepID=UPI0002FAFAFD
SCNpilot_cont_300_bf_scaffold_3045_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8766..9236
DNA (471bp) protein (157aa)
GCN5-related N-acetyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E298_9MICO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDK01236.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3045_curated_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9233..9835)
DNA (603bp) protein (201aa)
fructose-2,6-bisphosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
histidine phosphatase n=1 Tax=Microbacterium yannicii RepID=UPI0002F9B245
Histidine phosphatase {ECO:0000313|EMBL:KHK96181.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_cont_300_bf_scaffold_3045_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9894..10934)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002ECE566
Aldo/keto reductase {ECO:0000313|EMBL:CDK01234.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
oxidoreductase
SCNpilot_cont_300_bf_scaffold_3045_curated_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11144..13426)
DNA (2283bp) protein (761aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
pnp; polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
polynucleotide phosphorylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371CC37
SCNpilot_cont_300_bf_scaffold_3045_curated_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13650..13952
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036ABDCE
Uncharacterized protein {ECO:0000313|EMBL:EIC09264.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3045_curated_17
unknown

Not on your lists

13974..14180
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3045_curated_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14187..16166)
DNA (1980bp) protein (660aa)
glycosyltransferase; K12583 phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002ECEF6B
Glycosyl transferase {ECO:0000313|EMBL:KEP74091.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_cont_300_bf_scaffold_3045_curated_19
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16236..16922
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037F58C6
SNARE associated protein {ECO:0000313|EMBL:EZP25311.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3045_curated_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16926..17570)
DNA (645bp) protein (215aa)
FMN reductase (NADPH) {ECO:0000313|EMBL:KJL44946.1}; EC=1.5.1.38 {ECO:0000313|EMBL:KJL44946.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
flavoprotein; K00299 FMN reductase [EC:1.5.1.38]
NADPH-dependent FMN reductase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003650C2F
SCNpilot_cont_300_bf_scaffold_3045_curated_21
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17570..18817)
DNA (1248bp) protein (416aa)
Oxidoreductase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XKM6_9MICO
5,10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KHK96250.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
Displaying 21 items

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