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SCNpilot_cont_300_bf_scaffold_5285_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5285_curated_1
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1044)
DNA (1044bp) protein (348aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
argC; acetylglutamate semialdehyde dehydrogenase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037D4AF0
SCNpilot_cont_300_bf_scaffold_5285_curated_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1315..2058)
DNA (744bp) protein (248aa)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:KJL36367.1}; EC=3.1.1.45 {ECO:0000313|EMBL:KJL36367.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7A558
SCNpilot_cont_300_bf_scaffold_5285_curated_3
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2124..4655)
DNA (2532bp) protein (844aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
pheT; phenylalanyl-tRNA synthetase beta subunit; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364B2A0
SCNpilot_cont_300_bf_scaffold_5285_curated_4
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4655..5698)
DNA (1044bp) protein (348aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
pheS; phenylalanyl-tRNA synthetase alpha subunit; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMW1_9MICO
SCNpilot_cont_300_bf_scaffold_5285_curated_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5738..6538)
DNA (801bp) protein (267aa)
RNA methyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIR3_9MICO
RNA methyltransferase {ECO:0000313|EMBL:KHK96147.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rRNA methyltransferase
SCNpilot_cont_300_bf_scaffold_5285_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6637..7023)
DNA (387bp) protein (129aa)
50S ribosomal protein L20 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9K0_MICTS
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
rplT; ribosomal protein L20; K02887 large subunit ribosomal protein L20
SCNpilot_cont_300_bf_scaffold_5285_curated_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7055..7249)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B31CF8
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
50S ribosomal protein L35
SCNpilot_cont_300_bf_scaffold_5285_curated_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7319..7999)
DNA (681bp) protein (227aa)
Translation initiation factor IF-3 n=2 Tax=Microbacterium RepID=H8E2D6_9MICO
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
infC; translation initiation factor 3 (IF-3); K02520 translation initiation factor IF-3
SCNpilot_cont_300_bf_scaffold_5285_curated_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8223..8615
DNA (393bp) protein (131aa)
ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377F999
Uncharacterized protein {ECO:0000313|EMBL:KJL36356.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ATPase
SCNpilot_cont_300_bf_scaffold_5285_curated_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8637..9419)
DNA (783bp) protein (261aa)
Putative transcription termination factor n=1 Tax=Microbacterium sp. TS-1 RepID=U2XKI1_9MICO
Putative transcription termination factor {ECO:0000313|EMBL:GAD33502.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5285_curated_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9403..10149)
DNA (747bp) protein (249aa)
priA; phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24]
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000360EC26
SCNpilot_cont_300_bf_scaffold_5285_curated_12
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10216..10725)
DNA (510bp) protein (170aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hisH; glutamine amidotransferase; K02501 glutamine amidotransferase [EC:2.4.2.-]
glutamine amidotransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002EC2E3A
SCNpilot_cont_300_bf_scaffold_5285_curated_13
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10798..11409)
DNA (612bp) protein (204aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00263879};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
imidazoleglycerol-phosphate dehydratase n=1 Tax=Microbacterium yannicii RepID=UPI0002D58E9C
imidazoleglycerol-phosphate dehydratase
SCNpilot_cont_300_bf_scaffold_5285_curated_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11406..11648)
DNA (243bp) protein (81aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hisC1; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase n=2 Tax=Microbacterium RepID=H8E2D0_9MICO
Displaying 14 items

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