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SCNpilot_cont_300_bf_scaffold_4947_curated_5

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: comp(3697..4326)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Microbacterium barkeri RepID=UPI00030819E7 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 209.0
  • Bit_score: 394
  • Evalue 4.90e-107
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 209.0
  • Bit_score: 399
  • Evalue 2.10e-108
rpsD; ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 209.0
  • Bit_score: 379
  • Evalue 5.10e-103

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGGCAACGAAGTCCCAGGACCGCCGCAAGGTCCGCCTCTCGCGCGCGCTCGGCGTCGCGCTCACCCCCAAGGCCGCCCGCTACCTCGAGAAGCGCCCCTACGCGCCGGGTGAGCACGGCCGCACCAAGCGCAAGCAGGACAGCGACTACGCCGTCCGTCTCCGCGAGAAGCAGCGTCTGCGCGAGCAGTACGGCATCCGCGAGAAGCAGATGCGCAACACGTTCAACGAGGCCCGACGCCAGGACGGCCTGACCGGTGAGAACCTGGTCGAGCTGCTCGAGATGCGCCTCGACGCCCTCGTGCTCCGTGCCGGCTTCGCCCGCACGACCGCGCAGGCCCGCCAGCTCGTCGTGCACCGCCACATCCTGGTCGACGGCCAGAACGTGGACCGCCCGTCGTTCCGCGTGAAGCCGGGTCAGCTCATCCACGTCAAGCCCAAGAGCGAGGGCACCGAGCCCTTCCAGGTCGCGGCTGCCGGCGGTCACGCCGAGGTCCTGCCGAACGTCCCGGGCTACCTCGAGGTCGAGCTCGACAAGCTGCAGGCGCGCCTCGTGCGTCGCCCGAAGCGCGCCGAGGTGCCCGTCACGTGTGACGTGCAGCTGGTCGTCGAGTACTACGCGGCTCGCTAG
PROTEIN sequence
Length: 210
VATKSQDRRKVRLSRALGVALTPKAARYLEKRPYAPGEHGRTKRKQDSDYAVRLREKQRLREQYGIREKQMRNTFNEARRQDGLTGENLVELLEMRLDALVLRAGFARTTAQARQLVVHRHILVDGQNVDRPSFRVKPGQLIHVKPKSEGTEPFQVAAAGGHAEVLPNVPGYLEVELDKLQARLVRRPKRAEVPVTCDVQLVVEYYAAR*