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SCNpilot_cont_300_bf_scaffold_392_curated_1

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: comp(1..858)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJN5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 284.0
  • Bit_score: 207
  • Evalue 1.50e-50
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 284.0
  • Bit_score: 207
  • Evalue 4.70e-51
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEA25895.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 284.0
  • Bit_score: 207
  • Evalue 2.10e-50

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGTCGGTATCCCTTCTGACGACCAGAGCCGTCCGCGCGACCGCCTTGGCCGCTGCAGCATCCCTCGCCGCACTCGCCCTCGCGGGCTGCTCCGGCGGGGTCGCGACGCAGAACAACGCGAGCGCGGGCTCCGGCAGCTGCCCCTCCGAAGTGCAGATCGGCGCCCCGCTGCCGCTGTCCGGTCCCCTCGCCGACTTCGGCAACAACAGCCTCAACGGCATGAAGATCGCCGCCGACGACATCAACAAGGCCGGCGGCATGAAGTCCCTCGGCGGCGCGAAGCTCAAGATCGTCGCCGGCGACACGAGCTCCGCCGACGCCGGAACGGCCACGAGCGCGACCTCCAAGCTCATCGGCGACGGGGCGGTCGGCCTCATCGGTGCGTGGCTGAGCAACATGACCACGACCGTCAGCACGGTGGCCGAGCAGAGCGAGGTCCCGATCCTCACCCAGTCGTGGGCCGACGCCCTGTCGCAGCGCGGCTACAAGTACTACTTCCAGGCACCGCCGAAGTCGAGCGTCATCGGCAAGGCCGCGACCGACTACATGGTCGCCGCGGCGAAGTCGGTGGGCGTGACGTTCACGAAGGTCGCCGGCGTCGGCCCGAACGACGTTGCCAACACGACGCAGATCAACGCCGCCGTGACCGCGTTCAAGGCGGCGGGTGCGGCTGCGGATGCCCCCACGTTCTACCAGGCCGGCATCACCGACGCGACGCCGATCATCACGCGCATCGCCGCCCAGAAGGCCGACCTCATCCTCATCAGCGGTTCGCCTGCGGACGCGTCGCTGATCGTGAAGGGACTCCGGGCGGCCGGCATCACGACGCCGATCATGGGCTTCGGCGGCGCGTTCGTC
PROTEIN sequence
Length: 286
MSVSLLTTRAVRATALAAAASLAALALAGCSGGVATQNNASAGSGSCPSEVQIGAPLPLSGPLADFGNNSLNGMKIAADDINKAGGMKSLGGAKLKIVAGDTSSADAGTATSATSKLIGDGAVGLIGAWLSNMTTTVSTVAEQSEVPILTQSWADALSQRGYKYYFQAPPKSSVIGKAATDYMVAAAKSVGVTFTKVAGVGPNDVANTTQINAAVTAFKAAGAAADAPTFYQAGITDATPIITRIAAQKADLILISGSPADASLIVKGLRAAGITTPIMGFGGAFV