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SCNpilot_cont_300_bf_scaffold_392_curated

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_392_curated_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..858)
DNA (858bp) protein (286aa)
Extracellular ligand-binding receptor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJN5_PSEUX
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEA25895.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_300_bf_scaffold_392_curated_2
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1040..1438
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037F18BD
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EHJ06322.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter manganoxydans MnI7-9.;"
4-carboxymuconolactone decarboxylase
SCNpilot_cont_300_bf_scaffold_392_curated_3
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1431..2390
DNA (960bp) protein (320aa)
3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
Putative carboxymuconolactone decarboxylase n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TJC9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC46706.1}; TaxID=1220583 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108223.;"
SCNpilot_cont_300_bf_scaffold_392_curated_4
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2324..3211)
DNA (888bp) protein (296aa)
ornithine cyclodeaminase/mu-crystallin; K01750 ornithine cyclodeaminase [EC:4.3.1.12]
Ornithine cyclodeaminase/mu-crystallin n=2 Tax=Micromonospora RepID=D9SYM4_MICAI
Ornithine cyclodeaminase {ECO:0000313|EMBL:EWM16638.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_300_bf_scaffold_392_curated_5
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3208..3951)
DNA (744bp) protein (248aa)
Putative oxidoreductase, short-chain dehydrogenase/reductase n=1 Tax=Pseudomonas putida (strain DOT-T1E) RepID=I7C472_PSEPT
Uncharacterized protein {ECO:0000313|EMBL:KEP75240.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
butA; oxidoreductase, short-chain dehydrogenase/reductase
SCNpilot_cont_300_bf_scaffold_392_curated_6
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3963..5150)
DNA (1188bp) protein (396aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITH7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KJC65306.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
putative hydrolase
SCNpilot_cont_300_bf_scaffold_392_curated_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5233..5907)
DNA (675bp) protein (225aa)
GntR family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W0B2_9ACTO
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AGZ41425.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_300_bf_scaffold_392_curated_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6028..6321
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000362C57A
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KHK97454.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_392_curated_9
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6562..7776)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003662943
ROK family transcriptional regulator
Probable transcriptional regulator, ROK family protein {ECO:0000313|EMBL:ABG99253.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
SCNpilot_cont_300_bf_scaffold_392_curated_10
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7992..9269
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B582D3
Multiple sugar-binding protein {ECO:0000313|EMBL:KJQ55438.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_392_curated_11
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9266..10189
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037943F0
Trehalose transport system permease protein SugA {ECO:0000313|EMBL:KJQ55437.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
putative sugar ABC transporter permease; K02025 multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_392_curated_12
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10186..11016
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B4C31C
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJQ55436.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_392_curated_13
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

11013..12248
DNA (1236bp) protein (412aa)
Domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L5F2_THERP
domain protein
Domain protein {ECO:0000313|EMBL:ACM06683.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_cont_300_bf_scaffold_392_curated_14
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12250..13080
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4B4_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ82038.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_300_bf_scaffold_392_curated_15
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13097..13399
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037F0110
ethyl tert-butyl ether degradation protein EthD
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:ACQ82037.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_300_bf_scaffold_392_curated_16
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13396..14547
DNA (1152bp) protein (384aa)
Oxidoreductase domain protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4B2_BEUC1
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACQ82036.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_300_bf_scaffold_392_curated_17
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14552..15286
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B45172
Uncharacterized protein {ECO:0000313|EMBL:GAB96442.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hypothetical protein; K07090
SCNpilot_cont_300_bf_scaffold_392_curated_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15762..16799)
DNA (1038bp) protein (346aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSL2_LEIAQ
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERK71816.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
aldo/keto reductase
SCNpilot_cont_300_bf_scaffold_392_curated_19
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16796..17560)
DNA (765bp) protein (255aa)
2,5-dichloro-2,5-cyclohexadiene-1,4-dioldehydroge nase {ECO:0000313|EMBL:CBA27413.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBA27413.1};; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
2,5-dichloro-2,5-cyclohexadiene-1,4-dioldehydroge nase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7W4_9BURK
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_392_curated_20
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17652..18959)
DNA (1308bp) protein (436aa)
Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXZ5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFF98901.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
putative sugar ABC transporter, periplasmic binding protein
SCNpilot_cont_300_bf_scaffold_392_curated_21
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19049..20098)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Yaniella halotolerans RepID=UPI0003B6DEDA
Inner-membrane translocator (Modular protein) {ECO:0000313|EMBL:CCV10180.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
rbsC1; inner-membrane translocator
SCNpilot_cont_300_bf_scaffold_392_curated_22
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20095..21102)
DNA (1008bp) protein (336aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBA0_MESCW
Uncharacterized protein {ECO:0000313|EMBL:KFF98899.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
inner-membrane translocator
SCNpilot_cont_300_bf_scaffold_392_curated_23
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21099..22715)
DNA (1617bp) protein (539aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Yaniella halotolerans RepID=UPI0003B31677
Uncharacterized protein {ECO:0000313|EMBL:KFF98900.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
ribose ABC transporter, ATP-binding protein
SCNpilot_cont_300_bf_scaffold_392_curated_24
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22920..23879)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI0002FCA7A4
Uncharacterized protein {ECO:0000313|EMBL:AHH97452.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
metapyrocatechase
SCNpilot_cont_300_bf_scaffold_392_curated_25
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23900..24817)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030FF559
Uncharacterized protein {ECO:0000313|EMBL:AHH97450.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
fumarylacetoacetate hydrolase
SCNpilot_cont_300_bf_scaffold_392_curated_26
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25004..25726
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9WFL1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ESA38931.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
SCNpilot_cont_300_bf_scaffold_392_curated_27
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25723..26322
DNA (600bp) protein (200aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase (Modular protein) {ECO:0000313|EMBL:CCH88104.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CCH88104.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
hypothetical protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEA90
SCNpilot_cont_300_bf_scaffold_392_curated_28
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26304..26873
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036B390D
Uncharacterized protein {ECO:0000313|EMBL:KEP75187.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_392_curated_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26696..28168)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F90D45
Uncharacterized protein {ECO:0000313|EMBL:CDJ99796.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
TrwC relaxase
SCNpilot_cont_300_bf_scaffold_392_curated_30
unknown

Not on your lists

comp(28287..29162)
DNA (876bp) protein (292aa)

This feature has no annotations

Displaying items 1-30 of 62 in total

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