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SCNpilot_cont_1000_bf_scaffold_87_curated

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Displaying items 1-30 of 152 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_87_curated_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..516
DNA (516bp) protein (172aa)
Transketolase {ECO:0000313|EMBL:KJL37158.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KJL37158.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
tktA1; transketolase; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003792EB7
SCNpilot_cont_1000_bf_scaffold_87_curated_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

513..1631
DNA (1119bp) protein (373aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
tal2; transaldolase; K00616 transaldolase [EC:2.2.1.2]
Transaldolase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGV7_MICTS
SCNpilot_cont_1000_bf_scaffold_87_curated_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1628..3247
DNA (1620bp) protein (540aa)
Glucose-6-phosphate isomerase {ECO:0000256|SAAS:SAAS00115780}; EC=5.3.1.9 {ECO:0000256|SAAS:SAAS00115780};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pgiA; glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
glucose-6-phosphate isomerase n=1 Tax=Microbacterium yannicii RepID=UPI000319A00E
SCNpilot_cont_1000_bf_scaffold_87_curated_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3282..4832
DNA (1551bp) protein (517aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
zwf; glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
glucose 6-phosphate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036D295E
SCNpilot_cont_1000_bf_scaffold_87_curated_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4829..5764
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003746090
Glucose-6-phosphate dehydrogenase subunit {ECO:0000313|EMBL:KJL39198.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
opcA; glucose-6-P dehydrogenase subunit
SCNpilot_cont_1000_bf_scaffold_87_curated_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5773..6558
DNA (786bp) protein (262aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:KJL39197.1}; EC=3.1.1.31 {ECO:0000313|EMBL:KJL39197.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase; K01057 6-phosphogluconolactonase [EC:3.1.1.31]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036771C2
SCNpilot_cont_1000_bf_scaffold_87_curated_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6626..6982)
DNA (357bp) protein (119aa)
electron transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F5021
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
electron transport protein
SCNpilot_cont_1000_bf_scaffold_87_curated_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6989..7330)
DNA (342bp) protein (114aa)
Preprotein translocase, SecG subunit n=2 Tax=Microbacterium RepID=H8E2S4_9MICO
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KJL39195.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
SCNpilot_cont_1000_bf_scaffold_87_curated_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7346..8137)
DNA (792bp) protein (264aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
tpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDK3_9MICO
SCNpilot_cont_1000_bf_scaffold_87_curated_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8125..9342)
DNA (1218bp) protein (406aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pgk; 3-phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YK78_9MICO
SCNpilot_cont_1000_bf_scaffold_87_curated_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9348..10358)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
gap; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367829C
SCNpilot_cont_1000_bf_scaffold_87_curated_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10506..11132)
DNA (627bp) protein (209aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW7_MICTS
SCNpilot_cont_1000_bf_scaffold_87_curated_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11294..12271)
DNA (978bp) protein (326aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW8_MICTS
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K09762 hypothetical protein
SCNpilot_cont_1000_bf_scaffold_87_curated_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12307..13188)
DNA (882bp) protein (294aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Microbacterium yannicii RepID=UPI0002E4E940
Nucleotide-binding protein RR49_00564 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
P-loop-containing kinase; K06958 UPF0042 nucleotide-binding protein
SCNpilot_cont_1000_bf_scaffold_87_curated_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13213..15108)
DNA (1896bp) protein (632aa)
UvrABC system protein C n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGX0_MICTS
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
uvrC; nuclease subunit of the excinuclease complex; K03703 excinuclease ABC subunit C
SCNpilot_cont_1000_bf_scaffold_87_curated_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15110..18007)
DNA (2898bp) protein (966aa)
UvrABC system protein A n=2 Tax=Microbacterium RepID=H8E2R6_9MICO
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
uvrA; excinuclease ATPase subunit; K03701 excinuclease ABC subunit A
SCNpilot_cont_1000_bf_scaffold_87_curated_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18051..18488)
DNA (438bp) protein (146aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGX2_MICTS
Organic hydroperoxide resistance transcriptional regulator {ECO:0000313|EMBL:KJL39186.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_87_curated_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18520..18753
DNA (234bp) protein (78aa)
Rhs family protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XK52_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL39185.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rhs family protein
SCNpilot_cont_1000_bf_scaffold_87_curated_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18818..20890)
DNA (2073bp) protein (691aa)
UvrABC system protein B n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2R2_9MICO
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
uvrB; helicase subunit of the DNA excision repair complex; K03702 excinuclease ABC subunit B
SCNpilot_cont_1000_bf_scaffold_87_curated_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20951..21547)
DNA (597bp) protein (199aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036FDD16
SCNpilot_cont_1000_bf_scaffold_87_curated_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21584..22768)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371D932
Uncharacterized protein {ECO:0000313|EMBL:KJL39182.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
GGDEF domain
SCNpilot_cont_1000_bf_scaffold_87_curated_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22765..24351)
DNA (1587bp) protein (529aa)
Alginate biosynthesis sensor protein KinB {ECO:0000313|EMBL:KJL39181.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL39181.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000369DBDB
signal transduction histidine kinase
SCNpilot_cont_1000_bf_scaffold_87_curated_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24409..25605)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371D932
Uncharacterized protein {ECO:0000313|EMBL:KJL39180.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_bf_scaffold_87_curated_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25602..27314)
DNA (1713bp) protein (571aa)
Alkaline phosphatase synthesis sensor protein PhoR {ECO:0000313|EMBL:KJL39179.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL39179.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F39CF
signal transduction histidine kinase
SCNpilot_cont_1000_bf_scaffold_87_curated_25
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27458..28678)
DNA (1221bp) protein (407aa)
Putatie arabinose efflux permease n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLJ1_9MICO
Inner membrane transport protein YnfM {ECO:0000313|EMBL:KJL39178.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
major facilitator transporter
SCNpilot_cont_1000_bf_scaffold_87_curated_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(28770..30224)
DNA (1455bp) protein (485aa)
30S ribosomal protein S1 n=1 Tax=Microbacterium yannicii RepID=UPI00031BF966
Uncharacterized protein {ECO:0000313|EMBL:KJL39177.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
SCNpilot_cont_1000_bf_scaffold_87_curated_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30415..31023)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B37056
Uncharacterized protein {ECO:0000313|EMBL:KJL39176.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative TetR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_87_curated_28
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31085..31705
DNA (621bp) protein (207aa)
Multiple antibiotic resistance (MarC)-related protein n=2 Tax=Microbacterium RepID=H8E6V7_9MICO
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Multiple antibiotic transport protein marC
SCNpilot_cont_1000_bf_scaffold_87_curated_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31899..32387
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003671604
Uncharacterized protein {ECO:0000313|EMBL:KJL39174.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
translation elongation factors
SCNpilot_cont_1000_bf_scaffold_87_curated_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32401..33162)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003717029
NmrA-like family protein {ECO:0000313|EMBL:KJL39173.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
Displaying items 1-30 of 152 in total

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