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scnpilot_expt_750_p_scaffold_487_curated

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_487_curated_31
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33172..35463
DNA (2292bp) protein (764aa)
trehalose-phosphatase; K16055 trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
trehalose-phosphate synthase n=1 Tax=Agromyces italicus RepID=UPI0003B61B26
Trehalose-phosphatase {ECO:0000313|EMBL:ACZ31955.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
scnpilot_expt_750_p_scaffold_487_curated_32
Pseudomonas sp. GM21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35460..35942)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM21 RepID=J2NLB6_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM18271.1}; Flags: Precursor;; TaxID=1144325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM21.;"
calcium/calmodulin dependent protein kinase II association-domain-containing protein
scnpilot_expt_750_p_scaffold_487_curated_33
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35984..37354
DNA (1371bp) protein (457aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CBG2_MYCTH
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EHI14687.1}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibile ATCC 19527.;"
oxidoreductase
scnpilot_expt_750_p_scaffold_487_curated_34
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37489..39126
DNA (1638bp) protein (546aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
ilvD; dihydroxyacid dehydratase/phosphogluconate dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase id=7721481 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
scnpilot_expt_750_p_scaffold_487_curated_35
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39251..40135
DNA (885bp) protein (295aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KN57_9PROT
NmrA family protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
scnpilot_expt_750_p_scaffold_487_curated_36
unknown

Not on your lists

comp(40209..40655)
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_487_curated_37
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40942..42732
DNA (1791bp) protein (597aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
ilvB; acetolactate synthase 1 catalytic subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase id=7721482 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
scnpilot_expt_750_p_scaffold_487_curated_38
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42736..43242
DNA (507bp) protein (169aa)
Acetolactate synthase I small subunit {ECO:0000313|EMBL:EAR23924.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EAR23924.1};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ilvH; acetolactate synthase, regulatory subunit (EC:2.2.1.6)
Acetolactate synthase I small subunit id=7721483 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
scnpilot_expt_750_p_scaffold_487_curated_39
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43267..44292
DNA (1026bp) protein (342aa)
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
Ketol-acid reductoisomerase n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=ILVC_ARTCA
scnpilot_expt_750_p_scaffold_487_curated_40
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44339..45574)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XBD6_MYCNE
Uncharacterized protein {ECO:0000313|EMBL:CDQ46067.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_41
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45643..47238
DNA (1596bp) protein (532aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KJL35378.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KJL35378.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
serA; phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
3-phosphoglycerate dehydrogenase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5D302
scnpilot_expt_750_p_scaffold_487_curated_42
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47431..48486
DNA (1056bp) protein (352aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:KEP74439.1}; EC=1.1.1.85 {ECO:0000313|EMBL:KEP74439.1};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
leuB; isocitrate/isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7AC08
scnpilot_expt_750_p_scaffold_487_curated_43
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48536..49642
DNA (1107bp) protein (369aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EAR23914.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EAR23914.1};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
Branched-chain amino acid aminotransferase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4ALA0_9ACTN
branched-chain amino acid aminotransferase
scnpilot_expt_750_p_scaffold_487_curated_44
actinobacterium acMicro-4, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49639..50415
DNA (777bp) protein (259aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Curtobacterium sp. B18 RepID=UPI0003495F17
Uncharacterized protein {ECO:0000313|EMBL:KGA05071.1}; TaxID=1504317 species="Bacteria; Actinobacteria.;" source="actinobacterium acMicro-4.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_45
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50483..51508
DNA (1026bp) protein (342aa)
membrane protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B6E575
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04086.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_46
unknown

Not on your lists

51614..52441
DNA (828bp) protein (276aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_487_curated_47
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52525..54018
DNA (1494bp) protein (498aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
Glutamate--tRNA ligase id=7721502 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
glutamyl-tRNA synthetase
scnpilot_expt_750_p_scaffold_487_curated_48
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54185..54853)
DNA (669bp) protein (223aa)
phospholipase/carboxylesterase (EC:3.1.-.-); K06999 phospholipase/carboxylesterase
Phospholipase/carboxylesterase family protein {ECO:0000313|EMBL:CBT74683.1}; EC=3.1.-.- {ECO:0000313|EMBL:CBT74683.1};; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
Phospholipase/carboxylesterase family protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VST0_ARTAR
scnpilot_expt_750_p_scaffold_487_curated_49
unknown

Not on your lists

comp(54911..55075)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_487_curated_50
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55509..56741
DNA (1233bp) protein (411aa)
Putative signal transduction histidine kinase n=1 Tax=Arthrobacter sp. Rue61a RepID=J7LLY7_9MICC
signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AFR27453.1}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
scnpilot_expt_750_p_scaffold_487_curated_51
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56738..57397
DNA (660bp) protein (220aa)
LuxR family transcriptional regulator n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B66309
yxjL1; transcriptional regulatoryprotein YxjL
Putative transcriptional regulatoryprotein YxjL {ECO:0000313|EMBL:AFR27452.1}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
scnpilot_expt_750_p_scaffold_487_curated_52
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

57609..65552
DNA (7944bp) protein (2648aa)
NHL repeat containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RF7_SOLUE
NHL repeat-containing protein
NHL repeat containing protein {ECO:0000313|EMBL:ABJ87763.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
scnpilot_expt_750_p_scaffold_487_curated_53
unknown

Not on your lists

65549..66163
DNA (615bp) protein (205aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_487_curated_54
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66130..67182)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003745DDA
Uncharacterized protein {ECO:0000313|EMBL:KJF19929.1}; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
LuxR family transcriptional regulator
Displaying items 31-54 of 54 in total

View Taxonomy