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scnpilot_expt_750_p_scaffold_487_curated

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_487_curated_1
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..951)
DNA (951bp) protein (317aa)
NAD-dependent dehydrogenase {ECO:0000313|EMBL:EPR76636.1}; EC=1.1.1.18 {ECO:0000313|EMBL:EPR76636.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
dehydrogenase id=7721323 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
oxidoreductase, NAD-binding domain protein
scnpilot_expt_750_p_scaffold_487_curated_2
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(951..2048)
DNA (1098bp) protein (366aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:KJQ53656.1}; EC=2.6.1.87 {ECO:0000313|EMBL:KJQ53656.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
PLP-dependent enzyme possibly involved in cellwall biogenesis n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYT4_9MICO
PLP-dependent enzyme possibly involved in cell wall biogenesis
scnpilot_expt_750_p_scaffold_487_curated_3
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2045..2638)
DNA (594bp) protein (198aa)
N-acetylglucosamine-1-phosphate uridylyltransferase/acetyltransferase id=7721325 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Acetylglucosamine-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ERI38287.2}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
acetyltransferase
scnpilot_expt_750_p_scaffold_487_curated_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2730..3842
DNA (1113bp) protein (371aa)
manA; mannose-6-phosphate isomerase (EC:5.3.1.8); K01809 mannose-6-phosphate isomerase [EC:5.3.1.8]
mannose-6-phosphate isomerase n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034647E0
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:EAR24808.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_487_curated_5
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3991..4311
DNA (321bp) protein (107aa)
transcription factor WhiB n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B36336
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
WhiB family transcriptional regulator
scnpilot_expt_750_p_scaffold_487_curated_6
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4377..7181
DNA (2805bp) protein (935aa)
Putative glycosyl transferase {ECO:0000313|EMBL:EPR77598.1}; EC=2.4.1.- {ECO:0000313|EMBL:EPR77598.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Regulatory protein id=7721338 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
glycosyl transferase
scnpilot_expt_750_p_scaffold_487_curated_7
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7178..8767
DNA (1590bp) protein (530aa)
Putative secreted protein id=7721339 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative secreted protein {ECO:0000313|EMBL:EPR77599.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_8
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8787..10118
DNA (1332bp) protein (444aa)
UDP-glucose 6-dehydrogenase YwqF {ECO:0000313|EMBL:KJL29304.1}; EC=1.1.1.22 {ECO:0000313|EMBL:KJL29304.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
UDP-glucose 6-dehydrogenase n=1 Tax=Glaciibacter superstes RepID=UPI0003B738FE
scnpilot_expt_750_p_scaffold_487_curated_9
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10132..10503)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000369D405
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW42226.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_expt_750_p_scaffold_487_curated_10
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10614..10826
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI25_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAT88503.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
scnpilot_expt_750_p_scaffold_487_curated_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10823..12298
DNA (1476bp) protein (492aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Agromyces subbeticus RepID=UPI0003B59835
cell division protein MraZ
scnpilot_expt_750_p_scaffold_487_curated_12
Arthrobacter sp. MWB30, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12384..13148)
DNA (765bp) protein (255aa)
MIP family channel protein id=7721348 bin=CNBR_ACT species=Renibacterium salmoninarum genus=Renibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KIA73996.1}; TaxID=1534409 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. MWB30.;"
aquaporin Z; K06188 aquaporin Z
scnpilot_expt_750_p_scaffold_487_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13325..14002
DNA (678bp) protein (226aa)
Two-component system, regulatory protein id=7721354 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Two-component system, regulatory protein {ECO:0000313|EMBL:EAR24790.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
mtrA; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07670 two-component system, OmpR family, response regulator MtrA
scnpilot_expt_750_p_scaffold_487_curated_14
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14013..15650
DNA (1638bp) protein (546aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
two-component system, sensor kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002893FE4
scnpilot_expt_750_p_scaffold_487_curated_15
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15647..17311
DNA (1665bp) protein (555aa)
lipoprotein LpqB id=7721356 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Lipoprotein LpqB {ECO:0000313|EMBL:EPR77612.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
lipoprotein LpqB
scnpilot_expt_750_p_scaffold_487_curated_16
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17417..18133
DNA (717bp) protein (239aa)
Competence protein F id=7721357 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EYT64214.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_17
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18143..18943
DNA (801bp) protein (267aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FUW5_ISOV2
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:KFD42692.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
scnpilot_expt_750_p_scaffold_487_curated_18
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19053..19736
DNA (684bp) protein (228aa)
RNA polymerase subunit sigma-54 n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289E223
Ribosomal subunit interface protein {ECO:0000313|EMBL:EPR77614.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19781..22573
DNA (2793bp) protein (931aa)
Protein translocase subunit SecA id=7721359 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA rbh
scnpilot_expt_750_p_scaffold_487_curated_20
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22583..23047)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287EBA0
Uncharacterized protein {ECO:0000313|EMBL:EAR24784.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_21
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23187..24683
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
Two-component system, sensor protein id=7721365 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
two-component system sensor protein
scnpilot_expt_750_p_scaffold_487_curated_22
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(24720..24968)
DNA (249bp) protein (83aa)
Transcriptional regulator WhiB id=7721366 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
regulatory protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_expt_750_p_scaffold_487_curated_23
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25156..25566
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028928E3
Uncharacterized protein {ECO:0000313|EMBL:EPR77624.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_24
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25586..26068)
DNA (483bp) protein (161aa)
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Microbacterium sp. TS-1 RepID=U2XCA7_9MICO
Peroxiredoxin {ECO:0000313|EMBL:GAD35566.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
scnpilot_expt_750_p_scaffold_487_curated_25
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26300..27841
DNA (1542bp) protein (514aa)
pntA; NAD(P) transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
UPI0003C7E011 related cluster n=1 Tax=unknown RepID=UPI0003C7E011
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:KIC69246.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
scnpilot_expt_750_p_scaffold_487_curated_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27844..29256
DNA (1413bp) protein (471aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2]
UPI0003C7E6B1 related cluster n=1 Tax=unknown RepID=UPI0003C7E6B1
scnpilot_expt_750_p_scaffold_487_curated_27
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29270..29977
DNA (708bp) protein (236aa)
protein tyrosine phosphatase n=1 Tax=Glaciibacter superstes RepID=UPI0003B35E80
Protein tyrosine phosphatase {ECO:0000313|EMBL:KDA05937.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_28
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30008..30709)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJ24_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33350.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_expt_750_p_scaffold_487_curated_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30762..32819)
DNA (2058bp) protein (686aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E7F38
Uncharacterized protein {ECO:0000313|EMBL:CDK01114.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_487_curated_30

Not on your lists

comp(32887..33117)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B47B87
Uncharacterized protein {ECO:0000313|EMBL:KGA20521.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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