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scnpilot_expt_750_p_scaffold_1978_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1978_curated_1
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..1544
DNA (1542bp) protein (514aa)
cpsG; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8]
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LCJ5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG64888.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
scnpilot_expt_750_p_scaffold_1978_curated_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1554..2840
DNA (1287bp) protein (429aa)
Malic enzyme n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z157_PSEST
malic enzyme
Uncharacterized protein {ECO:0000313|EMBL:AFN76617.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri DSM 10701.;"
scnpilot_expt_750_p_scaffold_1978_curated_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2850..3950)
DNA (1101bp) protein (367aa)
addA; adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
adenosine deaminase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003741ED6
Adenosine deaminase {ECO:0000313|EMBL:ERK73418.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_expt_750_p_scaffold_1978_curated_4
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4055..5347)
DNA (1293bp) protein (431aa)
deoA; thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4] id=7719819 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Thymidine phosphorylase {ECO:0000313|EMBL:EPR75323.1}; EC=2.4.2.4 {ECO:0000313|EMBL:EPR75323.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
thymidine phosphorylase
scnpilot_expt_750_p_scaffold_1978_curated_5
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5377..5805)
DNA (429bp) protein (143aa)
cdd; cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5] id=7719820 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Cytidine deaminase {ECO:0000313|EMBL:EPR75324.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EPR75324.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
cddA; cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5]
scnpilot_expt_750_p_scaffold_1978_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5866..7146)
DNA (1281bp) protein (427aa)
ABC transporter permease n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P4H6_LEIXC
Uncharacterized protein {ECO:0000313|EMBL:CDJ98870.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter permease
scnpilot_expt_750_p_scaffold_1978_curated_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7143..8378)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0R2G0_9MICO
Inner-membrane translocator {ECO:0000313|EMBL:CDJ98871.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter permease; K02057 simple sugar transport system permease protein
scnpilot_expt_750_p_scaffold_1978_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8393..9892)
DNA (1500bp) protein (500aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Monosaccharide-transporting ATPase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPW0_ISOV2
Putative sugar transport protein (ABC superfamily atp_bind) {ECO:0000313|EMBL:CDJ98872.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
scnpilot_expt_750_p_scaffold_1978_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9984..11093)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0R2F8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CDJ98873.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
substrate-binding transport lipoprotein; K07335 basic membrane protein A and related proteins
scnpilot_expt_750_p_scaffold_1978_curated_10
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

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comp(11254..12375)
DNA (1122bp) protein (374aa)
mannose-1-phosphate guanylyltransferase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289261D
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:EAR24186.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
mannose-1-phosphate guanylyltransferase
scnpilot_expt_750_p_scaffold_1978_curated_11
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

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12412..12879
DNA (468bp) protein (156aa)
sdhC; succinate dehydrogenase, cytochrome b subunit (EC:1.3.99.1)
Succinate dehydrogenase, cytochrome b-556 subunit n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKF6_9ACTN
Succinate dehydrogenase, cytochrome b-556 subunit {ECO:0000313|EMBL:EAR24184.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_p_scaffold_1978_curated_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

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12879..13355
DNA (477bp) protein (159aa)
sdhD; succinate dehydrogenase hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit id=7719829 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Succinate dehydrogenase, membrane subunit {ECO:0000313|EMBL:EAR24183.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
sdhD; succinate dehydrogenase, hydrophobic anchor subunit; K00242 succinate dehydrogenase membrane anchor subunit
scnpilot_expt_750_p_scaffold_1978_curated_13
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13366..14187
DNA (822bp) protein (274aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
succinate dehydrogenase n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036769F3
Displaying 13 items

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