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scnpilot_expt_750_p_scaffold_2267_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_2267_curated_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..640
DNA (639bp) protein (213aa)
bifunctional DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
DNA lyase n=1 Tax=Microbacterium barkeri RepID=UPI0002EEF68F
Putative formamidopyrimidine-DNA glycosylase-like protein {ECO:0000313|EMBL:KJL34676.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_expt_750_p_scaffold_2267_curated_2
Gordonia sp. NB4-1Y, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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662..1039
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI0003674B64
Uncharacterized protein {ECO:0000313|EMBL:EMP14297.1}; TaxID=1241906 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. NB4-1Y.;"
scnpilot_expt_750_p_scaffold_2267_curated_3
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1066..1617)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037049BE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH27573.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
scnpilot_expt_750_p_scaffold_2267_curated_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1689..2510
DNA (822bp) protein (274aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGA0_MICTS
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:BAJ76571.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_expt_750_p_scaffold_2267_curated_5
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2510..2935
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZQ1_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ81231.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
scnpilot_expt_750_p_scaffold_2267_curated_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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2932..3633
DNA (702bp) protein (234aa)
type 11 methyltransferase id=7719582 bin=CNBR_ACT species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=CNBR_ACT organism_group=Actinobacteria
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_expt_750_p_scaffold_2267_curated_7
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3647..4405)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000378F4A5
Contig_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02818.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
hypothetical protein; K07052 rbh
scnpilot_expt_750_p_scaffold_2267_curated_8
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4438..5499
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MRM3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG64606.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
extracellular solute-binding protein family 5
scnpilot_expt_750_p_scaffold_2267_curated_9
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5643..7295
DNA (1653bp) protein (551aa)
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BKP4_SANKS
oligopeptide ABC transporter periplasmic protein
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:ACZ22521.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
scnpilot_expt_750_p_scaffold_2267_curated_10
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7381..8313
DNA (933bp) protein (311aa)
ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B55A08
Strain 70137, complete genome {ECO:0000313|EMBL:AJM77929.1}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
dppB; ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
scnpilot_expt_750_p_scaffold_2267_curated_11
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8300..9259
DNA (960bp) protein (320aa)
peptide ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B3DDD9
Peptide ABC transporter permease {ECO:0000313|EMBL:KDA06554.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ABC transporter permease
scnpilot_expt_750_p_scaffold_2267_curated_12
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9256..11007
DNA (1752bp) protein (584aa)
ABC transporter ATP-binding protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B60E17
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDA06555.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
putative peptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
scnpilot_expt_750_p_scaffold_2267_curated_13
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11078..12265
DNA (1188bp) protein (396aa)
salicylate 1-monooxygenase; K00480 salicylate hydroxylase [EC:1.14.13.1]
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y8R4_9BRAD
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EHR00203.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
scnpilot_expt_750_p_scaffold_2267_curated_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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12415..12711
DNA (297bp) protein (99aa)
bipA; GTP-binding protein typA/bipA-like protein; K06207 GTP-binding protein id=7719566 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
GTP-binding protein TypA {ECO:0000313|EMBL:ERK73442.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
GTP-binding protein elongation factor
Displaying 14 items

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