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SCNpilot_expt_1000_bf_scaffold_682_curated

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_682_curated_1
Propionibacterium humerusii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99..377)
DNA (279bp) protein (93aa)
Putative Ferredoxin-like protein FixX n=2 Tax=Propionibacterium acnes RepID=E4BHF1_PROAA
Putative Ferredoxin-like protein FixX {ECO:0000313|EMBL:EFS92777.1}; TaxID=765109 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium humerusii HL044PA1.;"
Ferredoxin-like protein fixX; K03855 ferredoxin like protein
SCNpilot_expt_1000_bf_scaffold_682_curated_2
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(383..1213)
DNA (831bp) protein (277aa)
FAD dependent oxidoreductase; K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
FAD-dependent oxidoreductase n=1 Tax=Actinomyces sp. ph3 RepID=UPI000316B364
FAD dependent oxidoreductase {ECO:0000313|EMBL:EKY16513.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
SCNpilot_expt_1000_bf_scaffold_682_curated_3
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1192..1482)
DNA (291bp) protein (97aa)
fixC; electron transfer flavoprotein FixC (EC:1.5.5.-); K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
FAD dependent oxidoreductase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVP4_DESFR
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFL51532.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
SCNpilot_expt_1000_bf_scaffold_682_curated_4
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1482..1652)
DNA (171bp) protein (57aa)
fixC; electron transfer flavoprotein FixC (EC:1.5.5.-); K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
FAD dependent oxidoreductase n=3 Tax=Propionibacterium RepID=F3P1Y0_9ACTO
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_expt_1000_bf_scaffold_682_curated_5
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1654..2565)
DNA (912bp) protein (304aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6W9K2_9ACTO
fixB; electron transfer flavoprotein FixB; K03522 electron transfer flavoprotein alpha subunit
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_expt_1000_bf_scaffold_682_curated_6
Actinomyces sp. oral taxon 848, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2610..3383)
DNA (774bp) protein (258aa)
Electron transfer flavoprotein domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNZ9_9ACTO
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:EEZ78326.1}; TaxID=649743 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 848 str. F0332.;"
fixA; electron transfer flavoprotein FixA; K03521 electron transfer flavoprotein beta subunit
SCNpilot_expt_1000_bf_scaffold_682_curated_7
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3398..4843)
DNA (1446bp) protein (482aa)
metabolite transporter n=1 Tax=Bacillus sp. AP8 RepID=UPI0003195153
general substrate transporter; K08368 MFS transporter, putative metabolite transport protein
General substrate transporter {ECO:0000313|EMBL:ABO49120.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
SCNpilot_expt_1000_bf_scaffold_682_curated_8
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4901..5755)
DNA (855bp) protein (285aa)
dehydratase; K08078 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase [EC:4.2.1.107]
MaoC domain protein dehydratase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J216_DESRM
MaoC domain protein dehydratase {ECO:0000313|EMBL:ABO49119.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
SCNpilot_expt_1000_bf_scaffold_682_curated_9
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5759..7357)
DNA (1599bp) protein (533aa)
caiC; putative crotonobetaine/carnitine-CoA ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
Putative crotonobetaine/carnitine-CoA ligase n=1 Tax=Eggerthella sp. HGA1 RepID=F0HRK7_9ACTN
Putative crotonobetaine/carnitine-CoA ligase {ECO:0000313|EMBL:EGC88054.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
SCNpilot_expt_1000_bf_scaffold_682_curated_10
Actinobaculum sp. oral taxon 183, Actinobaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7409..8500)
DNA (1092bp) protein (364aa)
crotonobetainyl-CoA:carnitine CoA-transferase n=1 Tax=Bacillus sp. AP8 RepID=UPI000307C068
Putative crotonobetainyl-CoA:carnitine CoA-transferase {ECO:0000313|EMBL:ERH17690.1}; TaxID=1227261 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinobaculum.;" source="Actinobaculum sp. oral taxon 183 str. F0552.;"
crotonobetainyl-CoA:carnitine CoA-transferase
SCNpilot_expt_1000_bf_scaffold_682_curated_11
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8643..9776)
DNA (1134bp) protein (378aa)
caiA; crotonobetainyl-CoA dehydrogenase (EC:1.3.99.-); K08297 crotonobetainyl-CoA dehydrogenase [EC:1.3.99.-]
Crotonobetainyl-CoA dehydrogenase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PL59_9ACTO
Crotonobetainyl-CoA dehydrogenase {ECO:0000313|EMBL:EKY16504.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
SCNpilot_expt_1000_bf_scaffold_682_curated_12
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9848..10858)
DNA (1011bp) protein (337aa)
acetyl esterase; K01066 esterase / lipase [EC:3.1.1.-]
Putative carboxylesterase n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1RDF1_9ACTO
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_expt_1000_bf_scaffold_682_curated_13
Arcanobacterium haemolyticum, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10861..12249)
DNA (1389bp) protein (463aa)
Major facilitator superfamily MFS_1 n=1 Tax=Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018) RepID=D7BK87_ARCHD
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADH93067.1}; TaxID=644284 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC; 15585 / NCTC 8452 / 11018).;"
SCNpilot_expt_1000_bf_scaffold_682_curated_14
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12515..15154
DNA (2640bp) protein (880aa)
Transcriptional regulator, LuxR family n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0J4_XYLCX
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACZ32197.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_expt_1000_bf_scaffold_682_curated_15
unknown

Not on your lists

comp(15171..16037)
DNA (867bp) protein (289aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_682_curated_16
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16171..17745)
DNA (1575bp) protein (525aa)
levanase; K01212 levanase [EC:3.2.1.65]
Putative levanase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RFJ4_CLAMS
Putative levanase {ECO:0000313|EMBL:CAQ01054.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
SCNpilot_expt_1000_bf_scaffold_682_curated_17
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17788..18882)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJA8_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33434.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_expt_1000_bf_scaffold_682_curated_18
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18944..20344)
DNA (1401bp) protein (467aa)
Glycosyl hydrolase, family 43 n=1 Tax=Actinomyces massiliensis F0489 RepID=J1H3E8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AIQ32364.1}; TaxID=1536769 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
glycosyl hydrolase, family 32
SCNpilot_expt_1000_bf_scaffold_682_curated_19

Not on your lists

comp(20363..21568)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037BBA87
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACX49745.1}; TaxID=662659 species="Bacteria; environmental samples.;" source="uncultured marine bacterium 1n22.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_682_curated_20
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21587..22570)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036FD38F
ABC transporter permease {ECO:0000313|EMBL:KKB12400.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_682_curated_21
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22653..24656)
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035D739D
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:AEE96406.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
SCNpilot_expt_1000_bf_scaffold_682_curated_22
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24908..26224
DNA (1317bp) protein (439aa)
Transcriptional regulator, LacI family n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EKM8_AMYSD
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EZP29412.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_682_curated_23
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

26221..27252
DNA (1032bp) protein (344aa)
Oligopeptide ABC transporter, ATP-binding protein n=1 Tax=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) RepID=Q9X0F4_THEMA
peptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHC91631.1}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. Mc24.;"
SCNpilot_expt_1000_bf_scaffold_682_curated_24
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27245..28495
DNA (1251bp) protein (417aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZW18_MAHA5
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIL40548.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
peptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_682_curated_25
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28499..29869
DNA (1371bp) protein (457aa)
ADP-ribosylation/Crystallin J1 n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B3DA13
ADP-ribosylation/Crystallin J1
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:ADB31082.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_expt_1000_bf_scaffold_682_curated_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30009..33323)
DNA (3315bp) protein (1105aa)
ATPase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3U0_9MICO
ATPase {ECO:0000313|EMBL:EIC08427.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
exonuclease; K03546 exonuclease SbcC
SCNpilot_expt_1000_bf_scaffold_682_curated_27
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33320..34624)
DNA (1305bp) protein (435aa)
DNA repair exonuclease n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6105E
Uncharacterized protein {ECO:0000313|EMBL:KJC64830.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
DNA repair exonuclease; K03547 exonuclease SbcD
SCNpilot_expt_1000_bf_scaffold_682_curated_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34724..35224)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036124EA
Uncharacterized protein {ECO:0000313|EMBL:ERK68131.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_682_curated_29
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35221..35610)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BS79_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ30571.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_expt_1000_bf_scaffold_682_curated_30
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35669..36808
DNA (1140bp) protein (380aa)
NAD/mycothiol-dependent formaldehyde dehydrogenase; K00153 S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
NAD/mycothiol-dependent formaldehyde dehydrogenase {ECO:0000313|EMBL:BAK33315.1}; EC=1.1.1.306 {ECO:0000313|EMBL:BAK33315.1};; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
NAD/mycothiol-dependent formaldehyde dehydrogenase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIY9_MICPN
Displaying items 1-30 of 77 in total

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