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SCNpilot_expt_1000_bf_scaffold_858_curated

Search features with annotation key words

Displaying items 31-60 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_858_curated_31
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37772..38494
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B3DAD8
Uncharacterized protein {ECO:0000313|EMBL:KGM02845.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_858_curated_32
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39046..40023)
DNA (978bp) protein (326aa)
TraSA:integrase fusion protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7SJG8_PROA4
TraSA:integrase fusion protein
TraSA:integrase fusion protein {ECO:0000313|EMBL:AFV89405.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_33
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40073..40957)
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Saccharomonospora azurea RepID=H8G4Q0_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHK87407.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea SZMC 14600.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_858_curated_34
unknown

Not on your lists

comp(40957..41457)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_858_curated_35
unknown

Not on your lists

comp(41460..41963)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_858_curated_36
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41976..42611)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPD9_ISOV2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEG43652.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_37
unknown

Not on your lists

comp(42874..43092)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_858_curated_38
Bradyrhizobium sp. UASWS1016, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43282..43485)
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Yaniella halotolerans RepID=UPI0003B6F0DD
Contig92, whole genome shotgun sequence {ECO:0000313|EMBL:KIU57311.1}; TaxID=1566379 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. UASWS1016.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_expt_1000_bf_scaffold_858_curated_39
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43862..44710)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003613ED0
Uncharacterized protein {ECO:0000313|EMBL:AIY03748.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
putative esterase; K07214 enterochelin esterase and related enzymes
SCNpilot_expt_1000_bf_scaffold_858_curated_40
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44843..45571
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4W2_BEUC1
hypothetical protein; K09861 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80090.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_41
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45651..46385)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4V7_BEUC1
hypothetical protein; K07164
Uncharacterized protein {ECO:0000313|EMBL:ACQ80085.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_42
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46455..46631)
DNA (177bp) protein (59aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4V6_BEUC1
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_858_curated_43
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47318..48499)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI0003705F21
FAD-binding monooxygenase {ECO:0000313|EMBL:KIH99060.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
FAD-binding monooxygenase
SCNpilot_expt_1000_bf_scaffold_858_curated_44
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48513..48857)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UTM2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB49080.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_858_curated_45
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48854..49381)
DNA (528bp) protein (176aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Ruania albidiflava RepID=UPI0003B3D91B
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KEP23378.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins
SCNpilot_expt_1000_bf_scaffold_858_curated_46
Nesterenkonia sp. AN1, Nesterenkonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49386..49730)
DNA (345bp) protein (115aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=652017 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Nesterenkonia.;" source="Nesterenkonia sp. AN1.;"
SufS subfamily cysteine desulfurase (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1RBC0_9ACTO
SCNpilot_expt_1000_bf_scaffold_858_curated_47
unknown

Not on your lists

49970..50869
DNA (900bp) protein (300aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_858_curated_48
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50718..51479)
DNA (762bp) protein (254aa)
FeS assembly ATPase SufC n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVY7_BEUC1
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
Cysteine desulfurase {ECO:0000313|EMBL:KJK10670.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
SCNpilot_expt_1000_bf_scaffold_858_curated_49
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51545..51910)
DNA (366bp) protein (122aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FT66_ISOV2
(2Fe-2S)-binding protein {ECO:0000313|EMBL:EYR62606.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Rieske (2Fe-2S) domain-containing protein; K05710 dioxygenase ferredoxin subunit
SCNpilot_expt_1000_bf_scaffold_858_curated_50
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(51915..53126)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0DZ61_9MICO
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_expt_1000_bf_scaffold_858_curated_51
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53126..54577)
DNA (1452bp) protein (484aa)
FeS assembly protein SufB n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVZ0_BEUC1
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:ACQ80591.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_52
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54695..55489)
DNA (795bp) protein (265aa)
Putative transcriptional regulator n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVZ1_BEUC1
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACQ80592.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_53
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55619..56608
DNA (990bp) protein (330aa)
ABC transporter related n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVZ2_BEUC1
ABC transporter; K09687 antibiotic transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACQ80593.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_54
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56605..57411
DNA (807bp) protein (269aa)
ABC-2 type transporter n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BRD0_XYLCX
ABC transporter; K09686 antibiotic transport system permease protein
ABC-2 type transporter {ECO:0000313|EMBL:ACZ30385.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_55
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57559..61317
DNA (3759bp) protein (1253aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZI7_BEUC1
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACQ79159.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_56
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61396..62415
DNA (1020bp) protein (340aa)
Cytochrome oxidase assembly n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVZ6_BEUC1
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15
Cytochrome oxidase assembly {ECO:0000313|EMBL:ACQ80597.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_57
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62476..63132)
DNA (657bp) protein (219aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
NUDIX hydrolase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVZ7_BEUC1
NUDIX hydrolase {ECO:0000313|EMBL:ACQ80598.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_858_curated_58
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63129..64829)
DNA (1701bp) protein (567aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2]
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
CTP synthase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVZ8_BEUC1
SCNpilot_expt_1000_bf_scaffold_858_curated_59
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64852..66012)
DNA (1161bp) protein (387aa)
Glycosyl transferase group 1 n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVZ9_BEUC1
Glycosyl transferase family 1 {ECO:0000313|EMBL:KGM12233.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
group 1 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_858_curated_60
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66043..67749)
DNA (1707bp) protein (569aa)
Virulence factor MVIN family protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BW00_BEUC1
virulence factor MVIN family protein; K03980 virulence factor
Virulence factor MVIN family protein {ECO:0000313|EMBL:ACQ80601.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying items 31-60 of 70 in total

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