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SCNpilot_expt_1000_bf_scaffold_804_curated

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_804_curated_1
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..2571)
DNA (2571bp) protein (857aa)
UPI0003C7E89F related cluster n=1 Tax=unknown RepID=UPI0003C7E89F
Uncharacterized protein {ECO:0000313|EMBL:AIY01162.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_804_curated_2
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2918..5524)
DNA (2607bp) protein (869aa)
ATP-dependent transcriptional regulator n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BJM9_SANKS
HTH-type transcriptional regulator malT {ECO:0000313|EMBL:AIY18996.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
ATP-dependent transcriptional regulator; K03556 LuxR family transcriptional regulator, maltose regulon positive regulatory protein
SCNpilot_expt_1000_bf_scaffold_804_curated_3
unknown

Not on your lists

5799..6125
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_804_curated_4
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6130..7041)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVY1_BEUC1
hypothetical protein; K07054
Uncharacterized protein {ECO:0000313|EMBL:ACQ80582.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_5
unknown

Not on your lists

comp(7085..7990)
DNA (906bp) protein (302aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_804_curated_6
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8092..8703
DNA (612bp) protein (204aa)
BioY protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVY0_BEUC1
BioY protein; K03523 putative biotin biosynthesis protein BioY
BioY protein {ECO:0000313|EMBL:ACQ80581.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_7
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8783..10381
DNA (1599bp) protein (533aa)
ABC transporter related n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVX6_BEUC1
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACQ80577.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_8
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10354..11253)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVX5_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80576.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_9
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11268..11483)
DNA (216bp) protein (72aa)
acetone carboxylase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B8B05
Acetone carboxylase {ECO:0000313|EMBL:KEP75549.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
N-methylhydantoinase A/acetone carboxylase, beta subunit
SCNpilot_expt_1000_bf_scaffold_804_curated_10
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11480..11788)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVX3_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80574.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_11
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11848..12567
DNA (720bp) protein (240aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVX2_BEUC1
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACQ80573.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_12
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12636..13403
DNA (768bp) protein (256aa)
short-chain dehydrogenase/reductase SDR; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UEC4_CELFN
SCNpilot_expt_1000_bf_scaffold_804_curated_13
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13417..13929
DNA (513bp) protein (171aa)
phosphohistidine phosphatase, SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Putative phosphohistidine phosphatase, SixA n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FT78_ISOV2
Putative phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:AEG44149.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_14
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13976..14647)
DNA (672bp) protein (224aa)
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3]
Phosphoserine phosphatase SerB n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVW9_BEUC1
Phosphoserine phosphatase {ECO:0000313|EMBL:KGM12207.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_expt_1000_bf_scaffold_804_curated_15
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14644..15855)
DNA (1212bp) protein (404aa)
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVW8_BEUC1
SCNpilot_expt_1000_bf_scaffold_804_curated_16
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15998..17290
DNA (1293bp) protein (431aa)
Glycogen synthase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVW7_BEUC1
glycogen synthase
Glycogen synthase {ECO:0000313|EMBL:ACQ80568.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_17
unknown

Not on your lists

comp(17422..17580)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_804_curated_18
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18168..18950
DNA (783bp) protein (261aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Iron ABC transporter ATP-binding protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2A4W7_9BACI
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERI39977.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
SCNpilot_expt_1000_bf_scaffold_804_curated_19
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19063..19542
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVW4_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80565.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_20
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19600..20766
DNA (1167bp) protein (389aa)
Band 7 protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVW3_BEUC1
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:ACQ80564.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_21
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20841..21671
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H0K3_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47372.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_22
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21696..22319
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003665517
Contig_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92426.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
GCN5-related N-acetyltransferase
SCNpilot_expt_1000_bf_scaffold_804_curated_23
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22375..24105
DNA (1731bp) protein (577aa)
ABC transporter transmembrane region n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVW2_BEUC1
ABC transporter permease; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter transmembrane region {ECO:0000313|EMBL:ACQ80563.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_24
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24102..26240
DNA (2139bp) protein (713aa)
ABC transporter related n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVW1_BEUC1
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter related {ECO:0000313|EMBL:ACQ80562.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_25
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26237..27058
DNA (822bp) protein (274aa)
tRNA/rRNA methyltransferase SpoU; K00599 [EC:2.1.1.-]
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVV8_BEUC1
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ACQ80559.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_26
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27069..27668)
DNA (600bp) protein (200aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-alcohol phosphatidyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVU6_BEUC1
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ACQ80547.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_27
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27803..28699
DNA (897bp) protein (299aa)
Lipoprotein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2ADA9_9BACI
NLPA lipoprotein; K02073 D-methionine transport system substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ERI41116.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
SCNpilot_expt_1000_bf_scaffold_804_curated_28
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28702..29778
DNA (1077bp) protein (359aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
ABC transporter related n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVV1_BEUC1
ABC transporter; K02071 D-methionine transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_804_curated_29
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29775..30431
DNA (657bp) protein (219aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVV0_BEUC1
binding-protein-dependent transport system inner membrane protein; K02072 D-methionine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACQ80551.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_804_curated_30
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30488..31375
DNA (888bp) protein (296aa)
ABC transporter ATP-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4BF34
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM10405.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
ABC transporter related protein; K09687 antibiotic transport system ATP-binding protein
Displaying items 1-30 of 45 in total

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