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SCNpilot_expt_1000_bf_scaffold_1846_curated_8

Organism: scnpilot_dereplicated_Micrococcales_3

near complete RP 52 / 55 MC: 6 BSCG 51 / 51 ASCG 14 / 38
Location: 7457..8320

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037AAFCC similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 287.0
  • Bit_score: 326
  • Evalue 2.20e-86
putative ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 287.0
  • Bit_score: 324
  • Evalue 3.50e-86
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:AEB43599.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 287.0
  • Bit_score: 324
  • Evalue 1.60e-85

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Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 864
GTGGCGCTGACCCTGCGGCTGGTGTGTGGCGTGACCACACGCGACATCGCCCGCGCGTTCTTGGTCCCGGAGGCCACGATGGCTGCGCGGATCACTCGGGCGAAGAAGAAGATCGCGGGCAGCCGTATCCCCTTCCGTATGCCATCGGACGCCGAGCTGCCCGACCGCCTCGACTCCACCCTCACCACCGTCTACGTGGCATTCACAGCCGGCCACACCGCGCCGAACGGTACCGATCTCGTCCGGAGCGACTTGGTCGAGTCCGCAATCAGGCTGGGTCGCGCACTACACGAGCTGCTGCCGGACGAGCCGGAGGTCGGCGGCCTGCTCGCGCTGATGCTGGTGACCGAAGCCCGGCGCAACGCGCGGGTCTCCGAGGCGGGCCGCCTCTTGACGCTGGGCGAGCAGGACCGCTCACGATGGAATCGTGATCTGATCGCCGAAAGCGACGTCCTCATTCGGGAGTCGCTCCGCCGTGCCCGGGGGCACCCCGGCCGCTTCGTGCTGCAAGCGTCCATAGCCGCTCTCTATTCCGAGCCTGAACGGCTCGCCGACAGTGACTGGCCGCAGATCCTCTACCTGTACGACCGCCTGCTGGACGTGTGGCCCTCACCGATCGTGGCCCTCAACCGGCTGGTTCCCTTGTCCTACGTCGCCGGCCCCGCGCTCGCGCTCGCCCACCTGAACGAGGTCGCACGCGATCCGCGGCTCGACACGTATCCGTATCTGCCCGCAGTGAAGGCCGATCTACTTTCCCGTCTGAACCGCCATGAGGACGCTGCCGAGCAGTACCGGCTCGCACGCCGACTCACCGGGAACCGGGTCGAGCAGGAGTTCCTGGACGACAGGATCGCCAGGCTCTAG
PROTEIN sequence
Length: 288
VALTLRLVCGVTTRDIARAFLVPEATMAARITRAKKKIAGSRIPFRMPSDAELPDRLDSTLTTVYVAFTAGHTAPNGTDLVRSDLVESAIRLGRALHELLPDEPEVGGLLALMLVTEARRNARVSEAGRLLTLGEQDRSRWNRDLIAESDVLIRESLRRARGHPGRFVLQASIAALYSEPERLADSDWPQILYLYDRLLDVWPSPIVALNRLVPLSYVAGPALALAHLNEVARDPRLDTYPYLPAVKADLLSRLNRHEDAAEQYRLARRLTGNRVEQEFLDDRIARL*