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SCNpilot_expt_1000_bf_scaffold_1846_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1846_curated_1
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..71
DNA (69bp) protein (23aa)
glycoside hydrolase family 2 TIM barrel; K01192 beta-mannosidase [EC:3.2.1.25]
beta-mannosidase n=1 Tax=Humibacter albus RepID=UPI0003B5EFFA
Glycoside hydrolase family 2 TIM barrel {ECO:0000313|EMBL:ACZ29307.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_2
unknown

Not on your lists

comp(283..2835)
DNA (2553bp) protein (851aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1846_curated_3
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2931..4232
DNA (1302bp) protein (434aa)
N-acylglucosamine 2-epimerase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BWJ4_BEUC1
N-acylglucosamine 2-epimerase
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:ACQ78652.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_4
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4258..5016)
DNA (759bp) protein (253aa)
Luciferase-like monooxygenase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BWK1_BEUC1
luciferase-like monooxygenase
Luciferase-like monooxygenase {ECO:0000313|EMBL:ACQ78659.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_5
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5010..5708)
DNA (699bp) protein (233aa)
NAD(P)H quinone oxidoreductase, PIG3 family n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5ULV2_CELFN
NAD(P)H quinone oxidoreductase
NAD(P)H quinone oxidoreductase, PIG3 family {ECO:0000313|EMBL:ADG76058.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_6
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5742..6182
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2S2_CELGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI10639.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_7
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6607..6990
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036F720D
DGPFAETKE family protein
DGPFAETKE family protein {ECO:0000313|EMBL:ABS04227.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_8
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7457..8320
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037AAFCC
putative ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:AEB43599.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_9
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8572..8961)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Micrococcus luteus RepID=UPI0002F7CE42
hypothetical protein; K08987 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEI11527.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_10
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9053..9490)
DNA (438bp) protein (146aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
alkylhydroperoxidase n=1 Tax=Rhodococcus rhodochrous RepID=UPI0002ED9D64
carboxymuconolactone decarboxylase family protein
SCNpilot_expt_1000_bf_scaffold_1846_curated_11
Segniliparus rugosus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9715..9924
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Mycobacterium abscessus M93 RepID=I0P8W5_MYCAB
CsbD family protein
Uncharacterized protein {ECO:0000313|EMBL:EFV14097.1}; TaxID=679197 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rugosus ATCC BAA-974.;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_12
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9989..11002)
DNA (1014bp) protein (338aa)
Glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase {ECO:0000313|EMBL:CCH31779.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CCH31779.1};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Glutathione S-transferase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K4I0_SACES
SCNpilot_expt_1000_bf_scaffold_1846_curated_13
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11034..11876)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. SJCon RepID=L8TML8_9MICC
Uncharacterized protein {ECO:0000313|EMBL:ELT43937.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1846_curated_14
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11873..12595)
DNA (723bp) protein (241aa)
Uncharacterized protein (Fragment) n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2A7Z6_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI39356.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1846_curated_15
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12642..13727)
DNA (1086bp) protein (362aa)
acetyltransferase n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI0003659D42
Transferase hexapeptide repeat protein {ECO:0000313|EMBL:EKX66014.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
Acetyltransferase
SCNpilot_expt_1000_bf_scaffold_1846_curated_16
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14269..14544)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BTH7_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ30956.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_17
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14541..16454)
DNA (1914bp) protein (638aa)
Ferrous iron transport protein B n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A4P4_CELGA
ferrous iron transport protein B; K04759 ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:AEI10860.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_18
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16451..16747)
DNA (297bp) protein (99aa)
FeoA family protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BTH9_XYLCX
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:ACZ30958.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_19
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17144..18163
DNA (1020bp) protein (340aa)
Putative AfsA/ScbA-like protein n=1 Tax=Streptomyces sp. W007 RepID=H0BFY8_9ACTO
AfsA/ScbA {ECO:0000313|EMBL:KIZ26556.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1846_curated_20
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18258..18878
DNA (621bp) protein (207aa)
regulatory protein TetR n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629D51
A-factor receptor protein {ECO:0000313|EMBL:KJL23690.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
arpA; A-factor receptor protein
SCNpilot_expt_1000_bf_scaffold_1846_curated_21
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18875..19705
DNA (831bp) protein (277aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:KJL23688.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJL23688.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Aur1I n=1 Tax=Streptomyces sp. C RepID=D9W585_9ACTO
monooxygenase FAD-binding protein
SCNpilot_expt_1000_bf_scaffold_1846_curated_22
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19756..20928)
DNA (1173bp) protein (391aa)
S-adenosyl-L-homocysteine hydrolase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JTP9_STRHJ
S-adenosyl-L-homocysteine hydrolase
S-adenosyl-L-homocysteine hydrolase {ECO:0000313|EMBL:AEY86150.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_23
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20925..21608)
DNA (684bp) protein (228aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Transcriptional coactivator/pterin dehydratase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6U4_CELFA
SCNpilot_expt_1000_bf_scaffold_1846_curated_24
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21932..23653
DNA (1722bp) protein (574aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BHQ0_SANKS
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM14459.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1846_curated_25
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23724..24776
DNA (1053bp) protein (351aa)
ABC-type polysaccharide transport system, permease component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BHQ1_SANKS
polysaccharide ABC transporter permease
ABC-type polysaccharide transport system, permease component {ECO:0000313|EMBL:ACZ21971.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_expt_1000_bf_scaffold_1846_curated_26
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24773..26092
DNA (1320bp) protein (440aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UJQ1_CELFN
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADG75689.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Displaying 26 items

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