ggKbase home page

SCNpilot_expt_1000_bf_scaffold_539_curated_29

Organism: scnpilot_dereplicated_Micrococcales_3

near complete RP 52 / 55 MC: 6 BSCG 51 / 51 ASCG 14 / 38
Location: comp(34160..35383)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 406.0
  • Bit_score: 654
  • Evalue 2.70e-185
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 406.0
  • Bit_score: 654
  • Evalue 1.20e-184
RNA-splicing ligase RtcB n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF45_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 406.0
  • Bit_score: 654
  • Evalue 8.60e-185

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cellulomonas flavigena → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGCACACAGAGCTCCCGACCCAGCTGACCGGGACCGCGGCACCCACCCTCATGTGGGCGCGCGAGGACGAGATCGAGCCGCAGGCGCTCCAGCAGCTCCGCACCATCGCCGCGCTCCCGTGGGTGCACGGCGTGCGCGTCATGCCCGACGTCCACCTCGGCAAGGGCGCGACCGTCGGCTCCGTCATCGCCATGCGCGACGCAGTCTCCCCCAACGCCGTCGGGGTCGACATCGGCTGCGGCATGAACGGTGTGCGGACCTCGCTGACGGCGGCCGACCTGCCCGACGACCTGCACCGACTGCGGTCGGCGATCGAGCGGGCGATCCCGGTCGGTTTCCGCGCGCACCGGGAGGCCGTCGACCTGCGGCGGCTGCGGCCGATCGCCGGCTCCGGCAACGCCGAGGCGCTGCGCGGGGAGGACGGCTTCTGGGACCGGTTCGCCGGCCTCACGCCGAAGGTCGCCGACCTGCACACGCGGGCGCTGCGGCAGCTCGGGACGCTCGGCGGTGGTAACCACTTCCTCGAGATCTGCCTCGACACCGACGACCGAGTGTGGCTCCAGCTGCACTCGGGCTCGCGGAACATCGGCAAGTCGCTCGCGGAGGTGCACGTCGCCATCGCGAAGGACCTCGACCACAACCAGGGCCTCGTCGACCGCGAGCTCGCCGTCCTGCTCGCCGGCACCCCGGAGATGAACGCGTACCTGCGCGACCTGACCTGGGCCCAGGAGTACGCGGCACGGTCGCGGGCGGTCATGATGACGCTGTTCGTCCAGGCCGTGCGGGACGCCCTGCCGGAGCTCGACATCGCCTTCGAGCAGGTCGCCAACGTCCACCACAACTACGTGCGGGTCGAGCACATCGACGGCGCGGACCTGATCGTCACCCGCAAGGGCGCGATCCGGGCGGGGGTCGGCGAGCTCGGGCTCATCCCGGGCTCGATGGGCACCGGCTCGTACATCGTGCGGGGGCTCGGCAACCCGGCCTCGTACTGGTCGGCCTCGCACGGGGCCGGCCGGCGGATGTCCCGGAACGAGGCGCGGCGGCGGTTCACCGTCGAGGACCTCGCCACGCAGACGGCCGGCGTCGAGTGCCGCAAGGACGCCGGCGTCATCGACGAGATCCCGGCCGCCTACAAGGACCTCGACGCGGTCATCGCCGCCCAGCACGACCTGGTCGAGGTCGTCACGCGGCTGCGCACGATCCTGTGCGTCAAGGGGTAG
PROTEIN sequence
Length: 408
MHTELPTQLTGTAAPTLMWAREDEIEPQALQQLRTIAALPWVHGVRVMPDVHLGKGATVGSVIAMRDAVSPNAVGVDIGCGMNGVRTSLTAADLPDDLHRLRSAIERAIPVGFRAHREAVDLRRLRPIAGSGNAEALRGEDGFWDRFAGLTPKVADLHTRALRQLGTLGGGNHFLEICLDTDDRVWLQLHSGSRNIGKSLAEVHVAIAKDLDHNQGLVDRELAVLLAGTPEMNAYLRDLTWAQEYAARSRAVMMTLFVQAVRDALPELDIAFEQVANVHHNYVRVEHIDGADLIVTRKGAIRAGVGELGLIPGSMGTGSYIVRGLGNPASYWSASHGAGRRMSRNEARRRFTVEDLATQTAGVECRKDAGVIDEIPAAYKDLDAVIAAQHDLVEVVTRLRTILCVKG*