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SCNpilot_expt_1000_bf_scaffold_539_curated

Search features with annotation key words

Displaying items 1-30 of 385 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_539_curated_1
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

1..705
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ24_CALAS
hypothetical protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
SCNpilot_expt_1000_bf_scaffold_539_curated_2
Corynebacterium glyciniphilum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

876..1718
DNA (843bp) protein (281aa)
Beta-lactamase inhibitory protein II n=1 Tax=Streptomyces sp. SPB74 RepID=B5GCK1_9ACTO
Putative beta-lactamase inhibitory protein II {ECO:0000313|EMBL:AHW63603.1}; TaxID=1404245 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glyciniphilum AJ 3170.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_539_curated_3
unknown

Not on your lists

1790..2263
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_curated_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2270..3739)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XI03_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK35672.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_expt_1000_bf_scaffold_539_curated_5
unknown

Not on your lists

3866..4048
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_curated_6
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4095..4841)
DNA (747bp) protein (249aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI000379BCEA
NUDIX hydrolase {ECO:0000313|EMBL:KGM00441.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
SCNpilot_expt_1000_bf_scaffold_539_curated_7
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4932..5906
DNA (975bp) protein (325aa)
ADP-ribosylation/Crystallin J1 n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3C1_CELFA
ADP-ribosylation/Crystallin J1
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:AEE45342.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_expt_1000_bf_scaffold_539_curated_8
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5869..7386)
DNA (1518bp) protein (506aa)
membrane protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629F98
Putative niacin/nicotinamide transporter NaiP {ECO:0000313|EMBL:KJL27950.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
permease of the major facilitator superfamily; K08369 MFS transporter, putative metabolite:H+ symporter
SCNpilot_expt_1000_bf_scaffold_539_curated_9
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8093..9565)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A13E6
Uncharacterized protein {ECO:0000313|EMBL:AHH17666.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
CRISPR-associated protein Cas1
SCNpilot_expt_1000_bf_scaffold_539_curated_10
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9902..12652)
DNA (2751bp) protein (917aa)
COG0553: Superfamily II DNA/RNA helicases, SNF2 family n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MDQ9_9NOCA
COG0553: Superfamily II DNA/RNA helicases, SNF2 family {ECO:0000313|EMBL:CCW13722.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
ATP-dependent helicase
SCNpilot_expt_1000_bf_scaffold_539_curated_11
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12842..13846)
DNA (1005bp) protein (335aa)
Esterase/lipase-like protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RDZ3_9BIFI
Esterase/lipase-like protein {ECO:0000313|EMBL:KJY65117.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
esterase/lipase-like protein
SCNpilot_expt_1000_bf_scaffold_539_curated_12
unknown

Not on your lists

comp(13958..15505)
DNA (1548bp) protein (516aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_curated_13
unknown

Not on your lists

comp(15483..16541)
DNA (1059bp) protein (353aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_curated_14
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16661..18592)
DNA (1932bp) protein (644aa)
ATP/GTP binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RB75_9ACTO
ATP-binding protein {ECO:0000313|EMBL:KGM10951.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
AAA ATPase; K09384 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_539_curated_15
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18787..19416)
DNA (630bp) protein (210aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3D2G5_9ACTO
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:EFC82877.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_539_curated_16
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(19531..20289)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036F2317
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_expt_1000_bf_scaffold_539_curated_17

Not on your lists

comp(20477..20839)
DNA (363bp) protein (121aa)
transcriptional modulator of MazE/toxin MazF; K07171 mRNA interferase [EC:3.1.-.-]
PemK-like protein n=1 Tax=mine drainage metagenome RepID=T0Z6W8_9ZZZZ
PemK-like protein {ECO:0000313|EMBL:EQD43786.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_expt_1000_bf_scaffold_539_curated_18
unknown

Not on your lists

comp(20836..21102)
DNA (267bp) protein (89aa)
transcriptional regulator, CopG family
SCNpilot_expt_1000_bf_scaffold_539_curated_19
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21392..22378
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVF3_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80540.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_curated_20
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22457..24070
DNA (1614bp) protein (538aa)
DNA-repair protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVF2_BEUC1
DNA-repair protein; K14161 protein ImuB
DNA-repair protein {ECO:0000313|EMBL:ACQ80539.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_curated_21
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24070..27798
DNA (3729bp) protein (1243aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7]
Error-prone DNA polymerase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVF1_BEUC1
SCNpilot_expt_1000_bf_scaffold_539_curated_22
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27847..29148)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVF0_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80537.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_curated_23
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29293..30276)
DNA (984bp) protein (328aa)
Aminoglycoside phosphotransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVE9_BEUC1
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACQ80536.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_curated_24
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30283..30801)
DNA (519bp) protein (173aa)
tRNA/rRNA methyltransferase SpoU; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVE6_BEUC1
SCNpilot_expt_1000_bf_scaffold_539_curated_25
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30853..32040)
DNA (1188bp) protein (396aa)
ATPase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVE5_BEUC1
ATPase
ATPase {ECO:0000313|EMBL:ACQ80532.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_539_curated_26
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32087..32785)
DNA (699bp) protein (233aa)
Predicted membrane protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BK42_SANKS
Vitamin K epoxide reductase {ECO:0000313|EMBL:KGM09692.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_539_curated_27
unknown

Not on your lists

33189..33497
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_539_curated_28
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33622..34125)
DNA (504bp) protein (168aa)
HNH endonuclease n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZZ1_CELFA
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:AEE44913.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_expt_1000_bf_scaffold_539_curated_29
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34160..35383)
DNA (1224bp) protein (408aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3]
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
RNA-splicing ligase RtcB n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF45_CELFN
SCNpilot_expt_1000_bf_scaffold_539_curated_30
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36051..37067
DNA (1017bp) protein (339aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5); K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5]
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:ACQ80505.1}; EC=3.4.15.5 {ECO:0000313|EMBL:ACQ80505.1};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Peptidyl-dipeptidase Dcp n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVB8_BEUC1
Displaying items 1-30 of 385 in total

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