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SCNpilot_cont_1000_p_scaffold_193_curated

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_193_curated_1
unknown

Not on your lists

comp(153..635)
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_193_curated_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(648..875)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y667_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ31026.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein; K08982 putative membrane protein
SCNpilot_cont_1000_p_scaffold_193_curated_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1229..1885)
DNA (657bp) protein (219aa)
Transport-associated protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y642_9SPHI
Transport-associated protein {ECO:0000313|EMBL:EHQ31001.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
transport-associated protein
SCNpilot_cont_1000_p_scaffold_193_curated_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2116..4683)
DNA (2568bp) protein (856aa)
magnesium-translocating P-type ATPase; K01531 Mg2+-importing ATPase [EC:3.6.3.2]
Magnesium-translocating P-type ATPase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y651_9SPHI
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:EHQ31010.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_193_curated_5
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4671..7055)
DNA (2385bp) protein (795aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
putative phosphoketolase (EC:4.1.2.22); K01632 fructose-6-phosphate phosphoketolase [EC:4.1.2.22]
Probable phosphoketolase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y320_9SPHI
SCNpilot_cont_1000_p_scaffold_193_curated_6
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7059..8249)
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
acetate kinase; K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y319_9SPHI
SCNpilot_cont_1000_p_scaffold_193_curated_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8464..9672
DNA (1209bp) protein (403aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YJ15_9SPHI
SCNpilot_cont_1000_p_scaffold_193_curated_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9647..10699
DNA (1053bp) protein (351aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YJ14_9SPHI
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EHQ27709.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
response regulator receiver
SCNpilot_cont_1000_p_scaffold_193_curated_9
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10780..11103
DNA (324bp) protein (108aa)
D-lactate dehydrogenase {ECO:0000313|EMBL:EOR95149.1}; EC=1.1.1.28 {ECO:0000313|EMBL:EOR95149.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002E8811A
hypothetical protein
SCNpilot_cont_1000_p_scaffold_193_curated_10
unknown

Not on your lists

11876..12277
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_193_curated_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13161..14384)
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCH3_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30651.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_193_curated_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14569..15204
DNA (636bp) protein (212aa)
haloacid dehalogenase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B350B8
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EHQ24739.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_cont_1000_p_scaffold_193_curated_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15213..16391)
DNA (1179bp) protein (393aa)
proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8]
proline dehydrogenase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B47B70
Proline dehydrogenase {ECO:0000313|EMBL:EHQ30307.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_193_curated_14
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16543..16749
DNA (207bp) protein (69aa)
RNA-binding protein S4 n=1 Tax=Cytophagales str. B6 RepID=UPI0003B54FD9
RNA-binding S4 domain protein {ECO:0000313|EMBL:EHQ30308.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RNA-binding S4 domain-containing protein; K14761 ribosome-associated protein
SCNpilot_cont_1000_p_scaffold_193_curated_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16759..17817
DNA (1059bp) protein (353aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5202F
SCNpilot_cont_1000_p_scaffold_193_curated_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17818..18744
DNA (927bp) protein (309aa)
fatty acid hydroxylase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B48B5B
Fatty acid hydroxylase {ECO:0000313|EMBL:EHQ30310.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
fatty acid hydroxylase
SCNpilot_cont_1000_p_scaffold_193_curated_17
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18741..19223)
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:ETZ21826.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCNpilot_cont_1000_p_scaffold_193_curated_18
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19337..20215
DNA (879bp) protein (293aa)
Glycoside hydrolase family 16 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BVJ1_9FLAO
Glycoside hydrolase family 16 {ECO:0000313|EMBL:EHQ02899.1}; Flags: Precursor;; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_193_curated_19
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20219..22771)
DNA (2553bp) protein (851aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGD3_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24485.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_193_curated_20
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23086..23973)
DNA (888bp) protein (296aa)
SdiA-regulated family protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H5N2_9SPHI
SdiA-regulated family protein {ECO:0000313|EMBL:EOR96484.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_193_curated_21
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23973..25202)
DNA (1230bp) protein (410aa)
Metal-dependent phosphohydrolase HD region n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YB86_9SPHI
Metal-dependent phosphohydrolase HD region {ECO:0000313|EMBL:EHQ30612.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
metal-dependent phosphohydrolase HD sub domain-containing protein
SCNpilot_cont_1000_p_scaffold_193_curated_22
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(25301..25783)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y458_9RHIZ
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
SCNpilot_cont_1000_p_scaffold_193_curated_23
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25961..26323
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248DB80
Uncharacterized protein {ECO:0000313|EMBL:CEG31983.1}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_193_curated_24
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26416..27861)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037F9717
RND transporter {ECO:0000313|EMBL:AKD58484.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
NodT family RND efflux system outer membrane lipoprotein
SCNpilot_cont_1000_p_scaffold_193_curated_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27863..31027)
DNA (3165bp) protein (1055aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS12_CHIPD
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ACU60806.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
SCNpilot_cont_1000_p_scaffold_193_curated_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31067..32212)
DNA (1146bp) protein (382aa)
secretion protein HylD n=1 Tax=Cytophagales str. B6 RepID=UPI0003B699AD
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_193_curated_27
unknown

Not on your lists

comp(32301..32690)
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_193_curated_28
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32839..37689)
DNA (4851bp) protein (1617aa)
PAS sensor protein; K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
Signal transduction histidine kinase with CheB and CheR activity n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y749_9SPHI
Signal transduction histidine kinase with CheB and CheR activity {ECO:0000313|EMBL:EHQ28668.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_193_curated_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37690..39219)
DNA (1530bp) protein (510aa)
Putative PAS/PAC sensor protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y750_9SPHI
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EHQ28669.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Phytochrome central region domain-containing protein
SCNpilot_cont_1000_p_scaffold_193_curated_30
unknown

Not on your lists

39517..39669
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying items 1-30 of 108 in total

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