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SCNpilot_cont_1000_p_scaffold_96_curated

Search features with annotation key words

Displaying items 1-30 of 177 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_96_curated_1
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..923)
DNA (921bp) protein (307aa)
RHS repeat-associated core domain protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTP5_SOLCM
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AFD06646.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_96_curated_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(947..5206)
DNA (4260bp) protein (1420aa)
YD repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PN48_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC92761.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_96_curated_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5266..6021)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VJW9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK58571.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_96_curated_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6411..7760)
DNA (1350bp) protein (450aa)
Radical SAM domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5Q5_9SPHI
Radical SAM domain protein {ECO:0000313|EMBL:EHQ29831.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
radical SAM protein
SCNpilot_cont_1000_p_scaffold_96_curated_5
unknown

Not on your lists

comp(7774..7968)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_96_curated_6
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7988..8641)
DNA (654bp) protein (218aa)
Resolvase domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5Q3_9SPHI
Resolvase domain-containing protein {ECO:0000313|EMBL:EHQ29829.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Resolvase domain-containing protein
SCNpilot_cont_1000_p_scaffold_96_curated_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8855..9334
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRM1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH56549.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_1000_p_scaffold_96_curated_8
unknown

Not on your lists

9412..9720
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_96_curated_9
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9998..10321
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO71670.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
SCNpilot_cont_1000_p_scaffold_96_curated_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10475..11095)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B41DCF
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29827.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_96_curated_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11159..11584
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B518DC
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29826.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_96_curated_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11581..11964)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5P9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29825.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_96_curated_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11996..13105)
DNA (1110bp) protein (370aa)
relaxase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3EFB8
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29824.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_96_curated_14
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13077..13454)
DNA (378bp) protein (126aa)
Mobilization protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5P7_9SPHI
Mobilization protein {ECO:0000313|EMBL:EHQ29823.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
mobilisation protein
SCNpilot_cont_1000_p_scaffold_96_curated_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13722..15524
DNA (1803bp) protein (601aa)
TRAG family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5P6_9SPHI
TRAG family protein {ECO:0000313|EMBL:EHQ29822.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TRAG family protein; K03205 type IV secretion system protein VirD4
SCNpilot_cont_1000_p_scaffold_96_curated_16
unknown

Not on your lists

15611..16660
DNA (1050bp) protein (350aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_96_curated_17
unknown

Not on your lists

16657..16932
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_96_curated_18
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17387..18364)
DNA (978bp) protein (326aa)
CHC2 zinc finger domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZU2_9FLAO
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EFK33872.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCNpilot_cont_1000_p_scaffold_96_curated_19
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18449..18649)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI00036A0CF4
Uncharacterized protein {ECO:0000313|EMBL:EAQ81491.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
AlpA family phage regulatory protein
SCNpilot_cont_1000_p_scaffold_96_curated_20
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18953..20350)
DNA (1398bp) protein (466aa)
Integrase family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5N1_9SPHI
Integrase family protein {ECO:0000313|EMBL:EHQ29807.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
integrase family protein
SCNpilot_cont_1000_p_scaffold_96_curated_21
unknown

Not on your lists

comp(20376..20618)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_96_curated_22

Not on your lists

comp(20716..23052)
DNA (2337bp) protein (779aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y0B7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD26028.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_96_curated_23
unknown

Not on your lists

comp(23039..23230)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_96_curated_24
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23473..23694)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B742FD
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29815.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_96_curated_25
Sulfurospirillum multivorans, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23696..24103)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FWH9_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:AHJ11750.1}; TaxID=1150621 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum multivorans DSM 12446.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_96_curated_26
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24106..24381)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6BF53
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29814.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_96_curated_27
unknown

Not on your lists

25037..25543
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_96_curated_28
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25607..25993
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KA84_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH01037.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_1000_p_scaffold_96_curated_29
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26000..26563)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B31E38
Uncharacterized protein {ECO:0000313|EMBL:KFN05620.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_96_curated_30
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26732..27979
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B57B32
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30372.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
Displaying items 1-30 of 177 in total

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