ggKbase home page

SCNpilot_cont_1000_p_scaffold_7_curated_11

Organism: scnpilot_dereplicated_Mucilaginibacter_1

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 15 / 38
Location: comp(17778..18470)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKD5_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 232.0
  • Bit_score: 296
  • Evalue 2.00e-77
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 232.0
  • Bit_score: 296
  • Evalue 6.20e-78
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU60221.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 232.0
  • Bit_score: 296
  • Evalue 2.80e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 693
ATGAGTCGTAAAATATTATATATAGAGGATGAGCCGTTCTTAGCGCGAATAGTAAGTGATGGATTAATTGCTTCCGGCTACGATGTTCAAATCGTTACTGATGGCAAACTGGCACTGAATATTTTCAAAAACTATCATCCCGACATTTGTCTATTGGATATTATGTTGCCTTCAAAGGACGGTTATCAGTTAGCAGAGGAAATCCGAGTAGTTGATCATAAAGTACCAATTCTGTTTTTGAGCGCTAAAGCTTTAACAACGGATGTTTTAAAAGGGTTTGCAAGTGGCGGTGATGACTATCTTAAAAAACCCTTTCATATGGATGAATTGTTGGCAAGGGTATCAGTCTTGATAAGACGAAGCCGTATTCATCACAAAGACGTCGAACCGGCAATATCCGAACTCAAGTTTGGTAAATGTAGCTTAGATGTTGTTAAACAGATATTAACAACCTCTACTGGGCGGACTTCACTTACGTTTAAGGAATGTTTATTATTAAAAATGCTGATTGAATCTGCAAATGATGTATTGACCAGACAGTCTGCGCTAATGAATATTTGGAACGACGACAGTTATTACAGTACCAGAAGTATGGACGTTTTTATTGCCCATCTTCGAAAATTAATTAAAAATGAAACTGGAATTCAGATTCTCACGCTACGGGGCATTGGTTACAAACTGCTGGTATGTTAA
PROTEIN sequence
Length: 231
MSRKILYIEDEPFLARIVSDGLIASGYDVQIVTDGKLALNIFKNYHPDICLLDIMLPSKDGYQLAEEIRVVDHKVPILFLSAKALTTDVLKGFASGGDDYLKKPFHMDELLARVSVLIRRSRIHHKDVEPAISELKFGKCSLDVVKQILTTSTGRTSLTFKECLLLKMLIESANDVLTRQSALMNIWNDDSYYSTRSMDVFIAHLRKLIKNETGIQILTLRGIGYKLLVC*