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SCNpilot_cont_1000_p_scaffold_7_curated_23

Organism: scnpilot_dereplicated_Mucilaginibacter_1

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 15 / 38
Location: 38345..38941

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Cytophagales str. B6 RepID=UPI0003B440EB similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 167.0
  • Bit_score: 172
  • Evalue 3.70e-40
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AHF15736.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 171.0
  • Bit_score: 159
  • Evalue 6.00e-36
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 196.0
  • Bit_score: 135
  • Evalue 1.60e-29

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
TTGCTATATTGGGCTAACGAAACGGGCGTGCCCCTTATGCAAAAAGATCAAGATTCGCTGAACAATAGATTACGGTCGGGTGACCATCAGGCTTTTGAATCGCTATTCAAAAGCCACTATCGTTTGATGACGCTTTTTGCGAACAGGATGGTGAATGATCTGGAAACCGCCCAGGAGATTGCAGGTGATGCCTTTACCACACTTTGGGAAAAAAGGGAAGAACTTGACATTACAGGATCATTGACATCTTATTTGTACAAGATGGTCCGGAACAGATGTCTGAATCACTTCAAGCATCAGCAAACCAAAAATCTTTTTTTAAACTATCTTCACCGTCATGATTTGGTGAATGTACAGGCCGAAAATTTTGAGAGGGCCTATGATGACAAGGAAATAGCTGAAAGGATCAGATCGGCAGTAAATGAACTACCACCGCAGTGCAAAATGGTGTTTTGTTTGAGCCGATACGAGCACTTAAAATACAAAGAGATCGCGGAGCGCCTCAACATTGCTGAAAAAACCGTAGAACGCCATATGACAATGGCGTTTGCCAAGCTGCGTCAGGCTTTAAAAAACGATTATTCGGTTTGGTTATAG
PROTEIN sequence
Length: 199
LLYWANETGVPLMQKDQDSLNNRLRSGDHQAFESLFKSHYRLMTLFANRMVNDLETAQEIAGDAFTTLWEKREELDITGSLTSYLYKMVRNRCLNHFKHQQTKNLFLNYLHRHDLVNVQAENFERAYDDKEIAERIRSAVNELPPQCKMVFCLSRYEHLKYKEIAERLNIAEKTVERHMTMAFAKLRQALKNDYSVWL*