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SCNpilot_cont_1000_p_scaffold_73_curated_10

Organism: scnpilot_dereplicated_Mucilaginibacter_1

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 15 / 38
Location: 13379..14704

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 457.0
  • Bit_score: 484
  • Evalue 1.80e-133
RNA-binding S4 domain-containing protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 486.0
  • Bit_score: 475
  • Evalue 1.90e-131
pseudouridylate synthase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6AB79 similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 468.0
  • Bit_score: 521
  • Evalue 9.50e-145

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Taxonomy

Sphingobacterium spiritivorum → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1326
ATGGTATTTAAAAGACCAGCCGGTAGTCGCGAAGACAGGCCAAACAGACAACAGGGACACTCGAAAAGTGGTGCCGATAACAACAAAAAAACCTCTTCTTCCGCTCCCTATGGAAGTCGTGATGCCGGTAAAAAGCCTTACGGCGACAGAAGGCAAACTTCAACCAATCCAAAACCATTTTCTCATAAAGCCTCGTTCGGTGATAACGAACAGGGAAAGAGCTTTGATGCGTCGTCATCATCGGGCGACAGAAGATCGTTTGCACCAAAAGGGAAGCCCTACAGCGGGAAACCTGAAAGTAGTGAGCGCCCTTATGGTACACGTAATGCCGAGGGTGGCCGTACCAATCGAGGTAGCTATGGCGAACAAGCCGGTGGCAAAAAAGGATTTGGTAAAAGCAAGCCATTCGGTGACAAGCCCCAAAGTGGCGAACGCCGTTCTTTTGGCGAAAACCGTGGTGGTTACACCAACAGCACCGGTAAAAAAGATTTTAAAAGCACAACATCCGGCTACAGGAAGCGTGAGGATAGGGACTTTAGCGATAAAAGCGAAGGTGCATCAAGAACCATGCGTGGCCGTAAAAATGCCCCTGCCGCGAAAGCTAAGGATGATGGCCTGATGAGGCTGAACCGTTACATCGCTAACGCCGGCATTTGCAGCCGCCGTAAAGCGGACGAACTTATCGAGGCCGGTGTGATCAGTGTAAATGGTGAGGTAGTATCAGAATTGGGTTACAAGGTTGATCCGTTTAAGGATGTCGTTCGTTATAACGGCGAGCCGCTTAAACGTGAGAAAATGGTGTATGTGCTTTTAAATAAGCCTAAAGATTACATCACCACTACCGATGACCCGCAGGAGCGTCGCACCGTTATGCACCTGGTAGAAAAAGCAAGCCGCGAACGCATTTATCCGGTTGGCCGCCTGGACAGGAACACTACCGGTTTATTGCTGATGACCAATGATGGTGAACTTGCAGACAAACTTTCGCACCCACGCAACAATATTGTAAAACTTTATAATGTGGAGTTAAACAAGAGCCTCACACAGGGCGACCTGAATAAAATATCGTTTGGTCTTGAACTGGAGGATGGCTTTATTAAGCCTGACAGTATATCGTACGTTACAGGTGGCAGCAAGCGCGAAGTAGGTATACAAATACATAGTGGTAAAAACCGTATTGTTCGCCGTATATTTGAATCGTTGGGCTACGAGGTAGTGAAGCTGGACAGGTCGGTATATGCCAACTTAACTAAAAAAGATCTTCCGAGGGGCCGTTGGAGATTCCTGGAAGAAAAGGAAGTGATACAGTTAAAACATTTAGTATAA
PROTEIN sequence
Length: 442
MVFKRPAGSREDRPNRQQGHSKSGADNNKKTSSSAPYGSRDAGKKPYGDRRQTSTNPKPFSHKASFGDNEQGKSFDASSSSGDRRSFAPKGKPYSGKPESSERPYGTRNAEGGRTNRGSYGEQAGGKKGFGKSKPFGDKPQSGERRSFGENRGGYTNSTGKKDFKSTTSGYRKREDRDFSDKSEGASRTMRGRKNAPAAKAKDDGLMRLNRYIANAGICSRRKADELIEAGVISVNGEVVSELGYKVDPFKDVVRYNGEPLKREKMVYVLLNKPKDYITTTDDPQERRTVMHLVEKASRERIYPVGRLDRNTTGLLLMTNDGELADKLSHPRNNIVKLYNVELNKSLTQGDLNKISFGLELEDGFIKPDSISYVTGGSKREVGIQIHSGKNRIVRRIFESLGYEVVKLDRSVYANLTKKDLPRGRWRFLEEKEVIQLKHLV*