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SCNpilot_cont_1000_p_scaffold_73_curated

Search features with annotation key words

Displaying items 1-30 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_73_curated_1
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

462..1883
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKY2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM33863.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
nad-dependent epimerase/dehydratase
SCNpilot_cont_1000_p_scaffold_73_curated_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2130..2939)
DNA (810bp) protein (270aa)
esterase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6117C
Esterase {ECO:0000313|EMBL:EHQ27822.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
esterase
SCNpilot_cont_1000_p_scaffold_73_curated_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3115..3774
DNA (660bp) protein (220aa)
esterase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B73C05
Esterase {ECO:0000313|EMBL:EHQ27821.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
putative esterase
SCNpilot_cont_1000_p_scaffold_73_curated_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3870..5003
DNA (1134bp) protein (378aa)
glutathione synthase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B64004
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27820.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_73_curated_5
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5120..6217
DNA (1098bp) protein (366aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
carboxylate-amine ligase; K06048 carboxylate-amine ligase [EC:6.3.-.-]
carboxylate-amine ligase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4B0EE
SCNpilot_cont_1000_p_scaffold_73_curated_6
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6314..7159
DNA (846bp) protein (282aa)
GMP synthase n=2 Tax=Cytophagales str. B6 RepID=UPI0003B552DA
GMP synthase {ECO:0000313|EMBL:EHQ27816.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
GMP synthase
SCNpilot_cont_1000_p_scaffold_73_curated_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7360..8556
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B51EDE
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27815.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_73_curated_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8815..12198
DNA (3384bp) protein (1128aa)
Glycosyl transferase family 2 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZX1_9SPHI
Glycosyl transferase family 2 {ECO:0000313|EMBL:EHQ27813.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
glycosyl transferase family protein
SCNpilot_cont_1000_p_scaffold_73_curated_9
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12350..13132)
DNA (783bp) protein (261aa)
murein transglycosylase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B594D6
lytic transglycosylase subunit
Contig76, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75997.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
SCNpilot_cont_1000_p_scaffold_73_curated_10
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13379..14704
DNA (1326bp) protein (442aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
RNA-binding S4 domain-containing protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
pseudouridylate synthase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6AB79
SCNpilot_cont_1000_p_scaffold_73_curated_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14819..15952
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2U8_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28493.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
6-phosphogluconolactonase
SCNpilot_cont_1000_p_scaffold_73_curated_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16028..16519)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B44D73
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28492.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_73_curated_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16585..17718)
DNA (1134bp) protein (378aa)
N-acetyl-alpha-D-glucosaminyl L-malate synthase n=1 Tax=Pedobacter arcticus RepID=UPI0002FB3620
Glycosyl transferase group 1 {ECO:0000313|EMBL:EHQ28490.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
group 1 glycosyl transferase
SCNpilot_cont_1000_p_scaffold_73_curated_14
unknown

Not on your lists

comp(17871..18284)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B76D0A
SCNpilot_cont_1000_p_scaffold_73_curated_15
unknown

Not on your lists

comp(18372..18620)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_73_curated_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18737..19429)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B41253
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ26941.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein; K09807 hypothetical protein
SCNpilot_cont_1000_p_scaffold_73_curated_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19592..20692
DNA (1101bp) protein (367aa)
DNA replication and repair protein RecF n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2W5_9SPHI
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF
SCNpilot_cont_1000_p_scaffold_73_curated_18
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20685..20975
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2W6_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28511.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_73_curated_19
unknown

Not on your lists

comp(20979..21179)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B51A27
SCNpilot_cont_1000_p_scaffold_73_curated_20
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21299..21718)
DNA (420bp) protein (140aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GM49_9SPHI
SCNpilot_cont_1000_p_scaffold_73_curated_21
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21842..22852
DNA (1011bp) protein (337aa)
Bifunctional oligoribonuclease and PAP phosphatase NrnA {ECO:0000313|EMBL:KHJ38197.1}; EC=3.1.-.- {ECO:0000313|EMBL:KHJ38197.1};; EC=3.1.3.7 {ECO:0000313|EMBL:KHJ38197.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
exopolyphosphatase, partial n=1 Tax=Cytophagales str. B6 RepID=UPI0003B54F63
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein
SCNpilot_cont_1000_p_scaffold_73_curated_22
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22867..23832
DNA (966bp) protein (322aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2W9_9SPHI
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
FKBP-type peptidylprolyl isomerase
SCNpilot_cont_1000_p_scaffold_73_curated_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23890..24873
DNA (984bp) protein (328aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2X0_9SPHI
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
FKBP-type peptidylprolyl isomerase
SCNpilot_cont_1000_p_scaffold_73_curated_24
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24924..25691
DNA (768bp) protein (256aa)
TatD family hydrolase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B79970
Hydrolase, TatD family {ECO:0000313|EMBL:EHQ28516.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TatD family hydrolase
SCNpilot_cont_1000_p_scaffold_73_curated_25
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25789..26808
DNA (1020bp) protein (340aa)
asparaginase (EC:3.5.1.1); K01424 L-asparaginase [EC:3.5.1.1]
1-alkyl-2-acetylglycerophosphocholine esterase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B72796
L-asparaginase, type I {ECO:0000313|EMBL:EHQ28517.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_73_curated_26
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26811..27524)
DNA (714bp) protein (238aa)
chemotaxis protein CheY n=1 Tax=Cytophagales str. B6 RepID=UPI0003B62D95
Uncharacterized protein {ECO:0000313|EMBL:KIA94756.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
LytTR family two component transcriptional regulator
SCNpilot_cont_1000_p_scaffold_73_curated_27
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27521..28537)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B42A38
Uncharacterized protein {ECO:0000313|EMBL:KIA94755.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
putative signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_73_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28753..29547
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5828A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96671.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_73_curated_29
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29707..31026
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4C78F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04627.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_p_scaffold_73_curated_30
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

31149..31514
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTV6_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ80013.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
Displaying items 1-30 of 191 in total

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