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SCNpilot_cont_1000_p_scaffold_58_curated_19

Organism: scnpilot_dereplicated_Mucilaginibacter_1

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 15 / 38
Location: 17890..18609

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 227.0
  • Bit_score: 383
  • Evalue 4.00e-104
ribosomal large subunit pseudouridine synthase D n=1 Tax=Cytophagales str. B6 RepID=UPI0003B69C4C similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 237.0
  • Bit_score: 417
  • Evalue 1.00e-113
Pseudouridine synthase {ECO:0000313|EMBL:EHQ26657.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 227.0
  • Bit_score: 394
  • Evalue 1.00e-106

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 720
ATGCGACCCGAACATACCTACATAAACAAAGACATTACCGACGCAGATGTGCTGTACGAGGACAATCACCTCATTGCCATTAACAAGCGTGCCGGTGATATTGTACAGGTTGATGAAACCGGCGACGAGCCACTGGACGAAAAAGTTAAGCGCTATATTGCTGCAAAATACAACAAACCCAATGGCGCGTTTTTGGGCGTAGTGCATCGTTTAGATCGCCCGGTGAGTGGCGTTATCCTGTTTGCCAAAACCAGTAAAGCGTTGGACAGGATCAACAAGATGTTTAAGAACCGCGAAATGCATAAAACCTATTTCGCCATTACAAGGCAGCAGCCTCAGCCCCCTGCCGGTAACCTGGTACACTGGTTGGTAAAAAACTCGCAGAAGAACGTCACCAAAGCACATGATAAGGAAGTGCAAGGCAGCCTGCGGTCCGAATTGAACTACAAGCTGGTTGGCCAGCGCGATGGCTATTCGGTTATTGAAGTAGATCCGATAACAGGCCGCCCACATCAGATACGCGTACAACTATCAACCCTGGGCTGCCCTATTGTAGGCGATAATAAATACGGCTATCCCCGCGGTAGCCTGCGCAAAAGCATTTGCCTGCATGCCCGCCGCTTAAAATTCATCCACCCGGTTAAAAATGAACCTATAGAGATTGTAGCCAGCCTACCTAAAGATGGCTTTTGGGATAAGTTTGAGGATCTGATACCGTAA
PROTEIN sequence
Length: 240
MRPEHTYINKDITDADVLYEDNHLIAINKRAGDIVQVDETGDEPLDEKVKRYIAAKYNKPNGAFLGVVHRLDRPVSGVILFAKTSKALDRINKMFKNREMHKTYFAITRQQPQPPAGNLVHWLVKNSQKNVTKAHDKEVQGSLRSELNYKLVGQRDGYSVIEVDPITGRPHQIRVQLSTLGCPIVGDNKYGYPRGSLRKSICLHARRLKFIHPVKNEPIEIVASLPKDGFWDKFEDLIP*