ggKbase home page

SCNpilot_cont_1000_p_scaffold_193_curated_80

Organism: scnpilot_dereplicated_Mucilaginibacter_1

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 15 / 38
Location: 97893..98522

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator, partial n=1 Tax=Cytophagales str. B6 RepID=UPI0003B45CD6 similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 194.0
  • Bit_score: 290
  • Evalue 9.90e-76
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EHQ29424.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 206.0
  • Bit_score: 257
  • Evalue 1.30e-65
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 201.0
  • Bit_score: 172
  • Evalue 1.60e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 630
ATGTCAAATGGTCAAATAGAGCGTATAATTTTAGGTGCTGAAGAGCTTTTTTTACAAGCTGGGATAAAGAGTGTTACTATGGATGACATTGCCAAACATTTAGGAATGTCTAAAAAAACTATTTATCATTTTTTTAACGATAAAAATGATCTCGTGATAGCCTTAGTAAAGAAGAAATTGATAGAAGACGAATGCCAAATACAGGATATTATCAATTCCTCAGCAAATGTTATGGAAGAGATGATCAATATGATGAAATGCTCTGAAGAAATATTCGGTCGTATCAATCCTATTGTCATACATGATATGCAAAAATATCATCCTTTGGCCTGGAGCGAATTCCAGAAGTTTAAATCAGAAGTATTGGTACATACGCTTGAGGAACTTTTAACTAAAGGCATACATCAAGGGTTCATCAGGCCGGATATTGATGTGCGTGTGCTGGCTAAAATGCGTGTTAATCAGGTAGAAATGGGCTTTAATACGGCTATTTTTCCTGTATCGCAGTTTAGCCCATGGAAAGTGCAGTATCAACTGTTAGAGCATTTTAATTATGGTATCTGTACGTTGAAAGGCCATGAACTATTAGATAAATATAAGACCGAACACACAGAAAAAATGGTTGGTTAA
PROTEIN sequence
Length: 210
MSNGQIERIILGAEELFLQAGIKSVTMDDIAKHLGMSKKTIYHFFNDKNDLVIALVKKKLIEDECQIQDIINSSANVMEEMINMMKCSEEIFGRINPIVIHDMQKYHPLAWSEFQKFKSEVLVHTLEELLTKGIHQGFIRPDIDVRVLAKMRVNQVEMGFNTAIFPVSQFSPWKVQYQLLEHFNYGICTLKGHELLDKYKTEHTEKMVG*