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SCNpilot_cont_1000_p_scaffold_1_curated_12

Organism: scnpilot_dereplicated_Mucilaginibacter_1

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 15 / 38
Location: comp(8970..10904)

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3P2_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 651.0
  • Bit_score: 579
  • Evalue 4.30e-162
General secretion pathway protein GspD {ECO:0000313|EMBL:KIA95224.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 643.0
  • Bit_score: 618
  • Evalue 8.90e-174
type II and III secretion system protein; K02666 type IV pilus assembly protein PilQ similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 651.0
  • Bit_score: 579
  • Evalue 1.30e-162

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1935
ATGCCCAAATTTATCGCGAGGCTGTGTGGTCTGCTGATCGTGTTAGGTTCCGTCAAAGGACTGGCCCAAGTACCAAACGCTGATCGCATTAAAGTCATTGAAACGAACCTCTCCCTGCTTGCCGGCCAGTCGCCCGGACTCAAACAGAAGGTGCAACTGAATGTCAGCGGTTTACCGATGCGCGATTATCTGAACGCGCTGGCACGTGCCACCGGCGTTAATATCAGTACAGACCCTTCGCTGACAGGCCCCGTATTTGATACGTTCAACGGTGTTACTGCGGCGGAAGTGCTCGCCTTCCTGGCATACAAGTACAGCCTGGACGTTAATGTGACCGGTTCCATCATTTTGGTGACGCCCTACAATCCCCCCATATCCGTGCTGCCTTCCCTGCCGCGGAACATCAATGCTTCCTACGATAAGATCGCCGGAACCTTATCCCTGGAGTTGAATAACGACAGCCTGCGATCCGTAGCCAGGCGTATTACGGCTATCTCCGGAAAAAATGTGGTCATTCCCGTGCCACTGCAGGAAAAAACGATAAGCGGCTTTATCGCCGCTGCGCCCTTTGATGCTGCTCTGGATAAGATCGCCTTTATCAATAATCTAAAAGTTTCCAGAACCGCTGACGGCTTCTATGTTTTCCAGGCACTGGAAGAGAACGAAGAAAACTATATCAACGGCGAAAAAAATACCGCCACCCGCAGGTTCGCCCGTTCACCCCAAGGCAAGACGCCAAACGCGGGCATTTTCGCGCGGATGAGCGGCGGCAAAAAACTACTGTCCGCAGAAGCTTTCAACGCCCCCATCGACGATCTGTTGCGCCAGGCATCTTCGGAAGCCGGAAAAAATTATGTCCTGTATACCGATCTGAAAGGTACCATCACACTGCACGTCAATGATGTCAGCTACGAAACCTTCTTGAGCATGCTGCTTAAAAACACAGAATACAGTTTCCGCCAGGATGATGGGGTATATTTTATTGGTGACCGTAAGGTTACCGGGGTCGCAACCTTTAAAACGGTCAAGCTCAAGCGTCGCGCCGTGGATTCCACGCTCATGAGAAGTTTACCATCCGAGATCACCAACGGTCTGCAGATCCAGCCTTTTCGCGAACTCAACGCCATTCTGTTGTCGGGATCTGCAATGAAGGTCAATGAAGCGGAAGCGGTGATCAGGCAACTGGACGAATTAGTTCCTGTTGTACTGATCGAGTTGACCATGATCGATGTACACAAAAATCGGGTAGTATCTACCGGTATTACCGCCGGCATCGCAGACAGCGTGAAAACCGGCGGCAGGATCTTACCAGGCATTAATTATACGTTCGGGTCTAAATCTATCAACGACTTTTTAGGAAGCGTAGGCAAGTTAACATCCTTAAACCTGGGTCATGTCACCCCCAATTTCTATGCCTCTGTCAACGCGCTGGAAAGCCAGGGCAATGTAGAAGTGCGTTCGGTACCCAAATTATCTTCCCTGAACGGTCACCCCGCGAGCTTTAGCATCGGCAAGCGGGCGTATTACAAAGATGTAACGCAAAGCATCTATCCCGGATTGAGCAACCCTACATCACAGTTCACCAACGTATACAAGGAGGTCAACGCCGATCTGTCTGTAAATATCAATCCTATAGTTTCCGATAATGAACAAGTCACGCTTAGCATCAAGATCAATATTTCCGACTTCCTGAATTTACCGACAGACGGCTCGCCACCACCACAGGCCATCAGTAAATACGAAACCAGTTTACGCGTCAAATCGGAAGATACGATCTTGTTAGGCGGAATTGAACGCACGGAAAGCAATGAGAGCGCTTCCGGGATTCCGCTATTATCCCGCATCCCCGTTCTGAAATGGATATTCAGCAGCCGGACGAAAAGCAATGACAAAGTAGTCACCCTTTTATTGATCAAATCCACTATTATCCGTTAA
PROTEIN sequence
Length: 645
MPKFIARLCGLLIVLGSVKGLAQVPNADRIKVIETNLSLLAGQSPGLKQKVQLNVSGLPMRDYLNALARATGVNISTDPSLTGPVFDTFNGVTAAEVLAFLAYKYSLDVNVTGSIILVTPYNPPISVLPSLPRNINASYDKIAGTLSLELNNDSLRSVARRITAISGKNVVIPVPLQEKTISGFIAAAPFDAALDKIAFINNLKVSRTADGFYVFQALEENEENYINGEKNTATRRFARSPQGKTPNAGIFARMSGGKKLLSAEAFNAPIDDLLRQASSEAGKNYVLYTDLKGTITLHVNDVSYETFLSMLLKNTEYSFRQDDGVYFIGDRKVTGVATFKTVKLKRRAVDSTLMRSLPSEITNGLQIQPFRELNAILLSGSAMKVNEAEAVIRQLDELVPVVLIELTMIDVHKNRVVSTGITAGIADSVKTGGRILPGINYTFGSKSINDFLGSVGKLTSLNLGHVTPNFYASVNALESQGNVEVRSVPKLSSLNGHPASFSIGKRAYYKDVTQSIYPGLSNPTSQFTNVYKEVNADLSVNINPIVSDNEQVTLSIKINISDFLNLPTDGSPPPQAISKYETSLRVKSEDTILLGGIERTESNESASGIPLLSRIPVLKWIFSSRTKSNDKVVTLLLIKSTIIR*