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SCNpilot_cont_1000_p_scaffold_1_curated

Search features with annotation key words

Displaying items 1-30 of 688 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1_curated_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..987
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3N7_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03316.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_p_scaffold_1_curated_2
unknown

Not on your lists

1001..1504
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_3
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1951..2904
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B57180
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06660.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_1_curated_4
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2904..3404
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTT6_SOLCM
Contig25, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77969.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1_curated_5
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3401..4006
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B698D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06662.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_1_curated_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3975..5264
DNA (1290bp) protein (430aa)
hypothetical protein, partial n=1 Tax=Cytophagales str. B6 RepID=UPI0003B48161
Uncharacterized protein {ECO:0000313|EMBL:EFK58543.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1_curated_7
unknown

Not on your lists

5252..5614
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_8
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5604..6104
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVP4_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06667.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_1_curated_9
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6082..7233
DNA (1152bp) protein (384aa)
type II secretion system protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4B5C5
type II secretory pathway, component PulF
Type II secretory pathway, component PulF {ECO:0000313|EMBL:AFD06668.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_1_curated_10
unknown

Not on your lists

comp(7235..7756)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5C846
SCNpilot_cont_1000_p_scaffold_1_curated_11
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7759..8967)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4C62F
Uncharacterized protein {ECO:0000313|EMBL:KIA95223.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1_curated_12
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8970..10904)
DNA (1935bp) protein (645aa)
Type II and III secretion system protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3P2_PEDHD
General secretion pathway protein GspD {ECO:0000313|EMBL:KIA95224.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
type II and III secretion system protein; K02666 type IV pilus assembly protein PilQ
SCNpilot_cont_1000_p_scaffold_1_curated_13
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10908..12323)
DNA (1416bp) protein (472aa)
general secretion pathway protein E n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3E49D
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:AFD06638.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_1_curated_14
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12848..13285)
DNA (438bp) protein (146aa)
general secretion pathway protein G n=1 Tax=Cytophagales str. B6 RepID=UPI0003B79817
Contig84, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75757.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCNpilot_cont_1000_p_scaffold_1_curated_15
unknown

Not on your lists

13425..13649
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_16
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13917..14606
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2L0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KDN54707.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1_curated_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14616..18698
DNA (4083bp) protein (1361aa)
YD repeat protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QDM5_SPILD
hypothetical protein
YD repeat protein {ECO:0000313|EMBL:ADB38155.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_1000_p_scaffold_1_curated_18
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18745..22590
DNA (3846bp) protein (1282aa)
sugar-binding protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4EF46
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AFD07432.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_1_curated_19
unknown

Not on your lists

22538..23110
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_20
unknown

Not on your lists

23564..23842
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_21
unknown

Not on your lists

23886..24335
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_22
unknown

Not on your lists

24367..24747
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_23
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24928..25770
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00035F99FC
Uncharacterized protein {ECO:0000313|EMBL:KJF44165.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
RHS repeat-associated core domain-containing protein
SCNpilot_cont_1000_p_scaffold_1_curated_24
Capnocytophaga sp. oral taxon 326, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25742..26029
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PY87_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKY20400.1}; TaxID=1035193 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 326 str. F0382.;"
SCNpilot_cont_1000_p_scaffold_1_curated_25
unknown

Not on your lists

26278..26706
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26754..27026
DNA (273bp) protein (91aa)
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA71_NIAKG
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEW03409.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_1_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27023..27658
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA72_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03410.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_1_curated_28
unknown

Not on your lists

28167..28346
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_29
unknown

Not on your lists

28588..28710
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1_curated_30
unknown

Not on your lists

28724..29011
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying items 1-30 of 688 in total

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