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SCNpilot_cont_1000_p_scaffold_170_curated_28

Organism: scnpilot_dereplicated_Mucilaginibacter_1

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 15 / 38
Location: 29382..29885

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Cytophagales str. B6 RepID=UPI0003B45A33 similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 166.0
  • Bit_score: 278
  • Evalue 4.10e-72
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ28504.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 166.0
  • Bit_score: 276
  • Evalue 2.80e-71
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 166.0
  • Bit_score: 235
  • Evalue 1.60e-59

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 504
ATGCAGCGCCGCGAGAAGATCGCCGCTGAAGCTTTGTATGATATGTATTCCGCGTCATTATATGGTGTTATCGTCCGTATTGTTATTCATGAGGAACTGGCCGAGGATGTTTTACAGGAAACATTTATAAAAATCTGGAATTCTTTTAATTCTTACAGTGCCGAAAAAGGGCGTTTATTTACCTGGATGGTCAATATTGCCCGGAATTTATCTATTGACAAGGTACGGTCCAAGGATTTTAGGAACCAGGGGAAAAACCAGGAACTCGAAAATAACGTAACTTTCATAGACGAACAAAGGAATACCGTTTACAACCCGGAATTGTTGGGTATCAGGGATATGGTTGCAAACCTTAAGCCTGAACAAAAATCCATTCTCGACCTGGTATATTTTAAAGGTTACACACACGTTGAGGCTGCCGAAGAACTGGGCATACCGCTTGGCACCATCAAAACGAGGTTAAGAATGGCTATTCAGCAACTCAGAAAATATTTTAATGAATAG
PROTEIN sequence
Length: 168
MQRREKIAAEALYDMYSASLYGVIVRIVIHEELAEDVLQETFIKIWNSFNSYSAEKGRLFTWMVNIARNLSIDKVRSKDFRNQGKNQELENNVTFIDEQRNTVYNPELLGIRDMVANLKPEQKSILDLVYFKGYTHVEAAEELGIPLGTIKTRLRMAIQQLRKYFNE*