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SCNpilot_cont_1000_p_scaffold_170_curated

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Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_170_curated_1
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

142..465
DNA (324bp) protein (108aa)
endonuclease n=1 Tax=Cytophagales str. B6 RepID=UPI0003B577B7
putative endonuclease containing a URI domain
Putative endonuclease containing a URI domain {ECO:0000313|EMBL:AFD08155.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_170_curated_2
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

972..2783
DNA (1812bp) protein (604aa)
GTP-binding protein TypA n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YD81_9SPHI
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:KHJ37309.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
GTP-binding protein TypA; K06207 GTP-binding protein
SCNpilot_cont_1000_p_scaffold_170_curated_3
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2872..3873
DNA (1002bp) protein (334aa)
Subtilisin-like serine protease n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L6B3_9CYAN
Contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIX14360.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_170_curated_4
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3939..5258
DNA (1320bp) protein (440aa)
Probable polysaccharide biosynthesis protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBZ0_9SPHI
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KIA93871.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
polysaccharide biosynthesis protein
SCNpilot_cont_1000_p_scaffold_170_curated_5
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5255..5908
DNA (654bp) protein (218aa)
FkbM family methyltransferase n=1 Tax=Pedobacter agri RepID=UPI00029A907B
FkbM family methyltransferase {ECO:0000313|EMBL:KIA93872.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
FkbM family methyltransferase
SCNpilot_cont_1000_p_scaffold_170_curated_6
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5923..6681
DNA (759bp) protein (253aa)
methyltransferase type 11 n=1 Tax=Pedobacter agri RepID=UPI00029A7C12
Methyltransferase type 11 {ECO:0000313|EMBL:KIA93873.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
type 11 methyltransferase
SCNpilot_cont_1000_p_scaffold_170_curated_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6705..7634
DNA (930bp) protein (310aa)
sugar transferase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B77E14
Sugar transferase {ECO:0000313|EMBL:EHQ27838.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
sugar transferase
SCNpilot_cont_1000_p_scaffold_170_curated_8
unknown

Not on your lists

7875..8117
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_170_curated_9
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8194..9288
DNA (1095bp) protein (365aa)
Transport protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E706_9SPHI
Transport protein {ECO:0000313|EMBL:EDM38692.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_170_curated_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9290..10237)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6A099
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27834.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_170_curated_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10261..10980)
DNA (720bp) protein (240aa)
DNA repair protein RecO n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YC09_9SPHI
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
SCNpilot_cont_1000_p_scaffold_170_curated_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10970..11335)
DNA (366bp) protein (122aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107]
DeoR family transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B670E6
Diacylglycerol kinase {ECO:0000313|EMBL:EHQ27088.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_170_curated_13
unknown

Not on your lists

comp(11332..11532)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_170_curated_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(11572..15402)
DNA (3831bp) protein (1277aa)
Methylmalonyl-CoA mutase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y700_9SPHI
methylmalonyl-CoA mutase, N-terminal domain/subunit
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_cont_1000_p_scaffold_170_curated_15
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15533..17035)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CD57_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ77668.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_1000_p_scaffold_170_curated_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17231..18181
DNA (951bp) protein (317aa)
radical SAM protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B70D0B
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28408.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein; K07139
SCNpilot_cont_1000_p_scaffold_170_curated_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18379..19620
DNA (1242bp) protein (414aa)
Acyltransferase 3 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y702_9SPHI
Acyltransferase 3 {ECO:0000313|EMBL:EHQ28409.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
acyltransferase 3
SCNpilot_cont_1000_p_scaffold_170_curated_18
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19634..20935
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5BCBE
Acetyl xylan esterase {ECO:0000313|EMBL:EHQ28410.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Acetyl esterase (deacetylase)
SCNpilot_cont_1000_p_scaffold_170_curated_19
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20944..21789
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B55D5F
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28411.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_170_curated_20
Cylindrospermopsis raciborskii, Cylindrospermopsis, Nostocales, Cyanobacteria, Bacteria

Not on your lists

21796..23820
DNA (2025bp) protein (675aa)
Putative uncharacterized protein n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=D4TII4_9NOST
Uncharacterized protein {ECO:0000313|EMBL:EFA69304.1}; TaxID=533240 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermopsis.;" source="Cylindrospermopsis raciborskii CS-505.;"
TPR repeat-containing protein rbh
SCNpilot_cont_1000_p_scaffold_170_curated_21
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23833..24300)
DNA (468bp) protein (156aa)
SRPBCC domain-containing protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B71AD4
Uncharacterized protein {ECO:0000313|EMBL:KHJ37389.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_170_curated_22
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24412..25257)
DNA (846bp) protein (282aa)
3-mercaptopyruvate sulfurtransferase; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
sulfurtransferase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B52535
Strain DSM 12611 Contig09, whole genome shotgun sequence {ECO:0000313|EMBL:KIO52548.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
SCNpilot_cont_1000_p_scaffold_170_curated_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25428..25901)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y707_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28414.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein; K09776 hypothetical protein
SCNpilot_cont_1000_p_scaffold_170_curated_24
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26263..26940
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B57A87
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:EHQ28509.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_170_curated_25
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27059..27559
DNA (501bp) protein (167aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 186
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B33C55
SCNpilot_cont_1000_p_scaffold_170_curated_26
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27772..28101
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2W2_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28507.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_170_curated_27
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28427..29305
DNA (879bp) protein (293aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8]
lipoyl synthase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4070B
SCNpilot_cont_1000_p_scaffold_170_curated_28
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29382..29885
DNA (504bp) protein (168aa)
RNA polymerase sigma-70 factor n=1 Tax=Cytophagales str. B6 RepID=UPI0003B45A33
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ28504.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_170_curated_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29885..30724
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2V8_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28503.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_170_curated_30
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30966..32471)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B319CC
YjeF-related protein {ECO:0000313|EMBL:EHQ28501.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
yjeF-like protein, hydroxyethylthiazole kinase-related protein
Displaying items 1-30 of 125 in total

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