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SCNpilot_cont_300_bf_scaffold_518_curated

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_518_curated_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

275..3220
DNA (2946bp) protein (982aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C63CB
hypothetical protein rbh
Bll2701 protein {ECO:0000313|EMBL:BAC47966.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_518_curated_2
unknown

Not on your lists

3234..4109
DNA (876bp) protein (292aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_518_curated_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4130..4786
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KGT77116.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCNpilot_cont_300_bf_scaffold_518_curated_4
unknown

Not on your lists

comp(5476..6870)
DNA (1395bp) protein (465aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_518_curated_5
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6867..8972)
DNA (2106bp) protein (702aa)
ATP binding/ATPase (HATPase_c) domain-containing protein n=3 Tax=Azotobacter vinelandii RepID=C1DR97_AZOVD
ATP binding/ATPase domain-containing protein
ATP binding/ATPase (HATPase_c) domain-containing protein {ECO:0000313|EMBL:ACO79755.1}; TaxID=322710 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii (strain DJ / ATCC BAA-1303).;"
SCNpilot_cont_300_bf_scaffold_518_curated_6
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8975..9922)
DNA (948bp) protein (316aa)
Site-specific DNA methylase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VX91_9PROT
Site-specific DNA methylase
Site-specific DNA methylase {ECO:0000313|EMBL:AGH97819.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_cont_300_bf_scaffold_518_curated_7
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10003..10428
DNA (426bp) protein (142aa)
DNA G:T-mismatch repair endonuclease n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SAF1_HAHCH
DNA G:T-mismatch repair endonuclease
DNA G:T-mismatch repair endonuclease {ECO:0000313|EMBL:ABC32373.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
SCNpilot_cont_300_bf_scaffold_518_curated_8
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10412..11572
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VF15_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH97818.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_cont_300_bf_scaffold_518_curated_9
unknown

Not on your lists

comp(11700..11999)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_518_curated_10
unknown

Not on your lists

comp(12133..12465)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_518_curated_11
unknown

Not on your lists

comp(12484..13032)
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_518_curated_12
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13280..13594
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Mesorhizobium RepID=V7F7T8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ46857.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_518_curated_13
unknown

Not on your lists

13685..13945
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_518_curated_14
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13971..14642
DNA (672bp) protein (224aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
DNA-methyltransferase n=1 Tax=Sphingobium baderi LL03 RepID=T0HUC0_9SPHN
DNA methylase N-4/N-6 domain-containing protein
SCNpilot_cont_300_bf_scaffold_518_curated_15
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14729..14932
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B7D7_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ12725.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_518_curated_16
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15486..16070
DNA (585bp) protein (195aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U8ET01_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AJP47694.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_518_curated_17
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16140..16370
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA008 RepID=U9MVI6_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP49364.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_cont_300_bf_scaffold_518_curated_18
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16388..17368
DNA (981bp) protein (327aa)
Replication initiator protein A n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y8Z3_9BRAD
Replication initiator protein A {ECO:0000313|EMBL:EHR00973.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
replication initiator protein A
SCNpilot_cont_300_bf_scaffold_518_curated_19
Asaia platycodi, Asaia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17555..17890
DNA (336bp) protein (112aa)
Cobyrinic acid a,c-diamide synthase n=3 Tax=Acetobacteraceae RepID=V8A4F9_9PROT
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein
Chromosome (Plasmid) partitioning protein ParA {ECO:0000313|EMBL:CDG39829.1}; TaxID=1382230 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Asaia.;" source="Asaia platycodi SF2.1.;"
SCNpilot_cont_300_bf_scaffold_518_curated_20

Not on your lists

17887..18162
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1ANI7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD62166.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_518_curated_21
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18159..18629
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QDZ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG57997.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_518_curated_22
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18626..19189
DNA (564bp) protein (188aa)
Conjugal transfer protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUC8_NITWN
Peptidase {ECO:0000313|EMBL:KHJ53858.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
conjugal transfer protein precursor
SCNpilot_cont_300_bf_scaffold_518_curated_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19224..19553
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK4_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06316.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_518_curated_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19589..19834
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06317.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_518_curated_25
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19831..20763
DNA (933bp) protein (311aa)
Lytic transglycosylase, catalytic n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUC7_NITWN
lytic transglycosylase, catalytic
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABA04114.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_518_curated_26
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20985..22949
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNP0_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA06101.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_518_curated_27

Not on your lists

23110..23709
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQB5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD39351.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_518_curated_28
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23706..24599
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LS19_DESBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU89402.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
SCNpilot_cont_300_bf_scaffold_518_curated_29
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24832..26886
DNA (2055bp) protein (685aa)
TRAG family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ8_POLNA
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:GAO21477.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
SCNpilot_cont_300_bf_scaffold_518_curated_30
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26883..27368
DNA (486bp) protein (162aa)
CopG family transcripitonal regulator n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B3F974
CopG family transcriptional regulator {ECO:0000313|EMBL:AJP47678.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
CopG/DNA-binding domain-containing protein
Displaying items 1-30 of 128 in total

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