ggKbase home page

SCNpilot_cont_300_bf_scaffold_436_curated_20

Organism: scnpilot_dereplicated_Nitrobacter_1

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 11 / 38
Location: comp(23586..24275)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV7_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 229.0
  • Bit_score: 433
  • Evalue 1.30e-118
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 229.0
  • Bit_score: 433
  • Evalue 4.20e-119
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AEI05266.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 229.0
  • Bit_score: 433
  • Evalue 1.90e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAGCACCTTTAAACGACCCGCACCGCATTACGGCAAGACACCTCAGCCCGAGACGCCCTACCAGCGCGCGGCGCAGGTCTGGGACGATCGCATCGGCTCCGCGCGCGTACAGGCGAAGAACTGGCGCATCATGGCCTTCGGATCGCTGATCCTGTCCGCCGGTTTTGCGGCGGCGCTGGTCTGGCAGTCGGCACGCGGCATCGTCGTGCCATGGGTCGTTCAGGTCGACAATCTCGGCCAGGCGCAGGCCGTCGCGCCGGCGACGGCCGACTATCGGCCAACCGATCCACAGGTGGCCTGGCATCTGGCACGCTTCATTGAACAGGTTCGTTCGATTCCGGCCGATCCCGTCATTGTCCGGCAACAATGGCTTCGCGCCTATGAATGGACCACGGATCGCGGCGCGGCCGCGCTCAACGATTACGCGAGGTCGGACGACCCGTTCACAAAGGTCGGCAAGCAACAGGTCGCGGTCGAAGTGTCGAGCGTCATTCGCGCGTCCACGGATTCTTTCCGCGTCGCCTGGATCGAGCGGCACTACGACAACGGCCAGCTCGCCACCACCGAACGCTGGACCGCGATCCTCACCATCGTCATCCAGCCGCCGCGCGACGCCGACCGGCTCAAGGCCAATCCGCTCGGAATCTATGTCAACGCCATCAACTGGTCGCGGGAGATGAGCCAATGA
PROTEIN sequence
Length: 230
MSTFKRPAPHYGKTPQPETPYQRAAQVWDDRIGSARVQAKNWRIMAFGSLILSAGFAAALVWQSARGIVVPWVVQVDNLGQAQAVAPATADYRPTDPQVAWHLARFIEQVRSIPADPVIVRQQWLRAYEWTTDRGAAALNDYARSDDPFTKVGKQQVAVEVSSVIRASTDSFRVAWIERHYDNGQLATTERWTAILTIVIQPPRDADRLKANPLGIYVNAINWSREMSQ*