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SCNpilot_cont_300_bf_scaffold_436_curated_24

Organism: scnpilot_dereplicated_Nitrobacter_1

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 11 / 38
Location: comp(26712..29150)

Top 3 Functional Annotations

Value Algorithm Source
CagE, TrbE, VirB component of type IV transporter system, conserved region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4H7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 810.0
  • Bit_score: 1465
  • Evalue 0.0
CagE, TrbE, VirB component of type IV transporter system, conserved region {ECO:0000313|EMBL:EFI52857.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 810.0
  • Bit_score: 1465
  • Evalue 0.0
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 812.0
  • Bit_score: 1459
  • Evalue 0.0

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2439
ATGATAAACCTCGCCGAATACCGCCGCACCGCTTCGCGTCTTGCCGATTATCTGCCATGGGCGGCATTGGTCGGTCCCGGCGTCGTGCTTAATAAAGACGGCAGTTTCCAGCGCAGCGCCAGGTTTCGCGGTCCCGATCTGGATTCCGCCGTCGCGGCCGAGCTGGTCGCCGTCGCCGGCCGCATCAACAACGCCTTCCGCCGCCTCGGCTCCGGCTGGAGCATTTTCGTCGAAGCCCAGCGGCATGAGGCTTCGACCTATCCGAACAGCACCTTTCCCGATCCGGCGTCCGCGCTGGTCGACGCCGAGCGCAAGGCCGATTTCGAGGAAGCGGGCGCGCATTTCGTATCGAGCTACTATCTCACCTTCCTCTATCTGCCGCCGGCCGAGGAAGCCGCGCGCGCCGAGACATGGCTCTACGAAGGACGCGAACGCTCCGGCGTCGATCCCCATGAGGTGATGCGCGCGTTCGTCGATCGCACCGACCGGGTGCTGGCCTTGCTCGATGGCTTCATGCCCGAATGCGCCTGGCTCGATGACGTCGAGACGCTGACCTACCTGCACTCCTGCGTCTCATTGAGCCGCCATCGCGTCCGCGTTCCAGAGACGCCGGTCTATCTCGACGCGCTGCTCGCCGATCAGCCGCTGACCGGCGGGCTGGAGCCGCGGCTTGGCGACCAGAGTCTCCGCATCCTCACCATCATCGGTTTCCCGACCGCGACCACGCCGGGCATCCTCGACGATCTCAACCGGCTGGCGTTTCCGTATCGCTGGTCAACGCGCGCGATCCTTCTGGACAAGACGGATGCGACGCGTCTGCTGACCAGGATCAGGCGGCAGTGGTTCGCCAAGCGCAAGAGCATCGCCGCGATCCTGAAAGAAGTGATGACCAACGAGCAATCCGTGCTCGTGGACACCGACGCCGCGAACAAGGCGGCGGACGCCGATATGGCCCTGCAGGAACTTGGGCAAGATGTCGCCGGCATGGCCTACGTCACCGCGACCATCACGGTCTGGGATACAGAGGTGCGTCTTGCGGATGAGAAGCTGCGGCTGGTCGAGAAGGTCATCCAGGGCCACGATTTCGCGGCCATGACCGAGACCGTCAACGCGGTGGATGCGTGGCTCGGTTCTCTGCCGGGGCACGCATACGCGAACGTCCGCCAGCCACCGGTCAGCACCTTGAATCTCGCCCACATGATCCCTCTCAGCGCCGTGTGGGCGGGCGAGGGGAGGGACGAGCACTTACGTGCACCCGCATTGCTCTATGGCAGAACCGAAGGCTCAACCCCGTTCCGGTTCTCCCTCCATGTCGGCGATGTCGGCCACACACTCATCATTGGGCCAACGGGCAGCGGCAAATCCGTACTGCTGGCGCTGATGGCGCTCCAGTTCCGCCGCTACGAGGGCAGTCAGGTCTTCGCCTTCGATTTCGGCGGCTCGATCCGGGCGGCCGCGCTCGCCATGGGCGGTGACTGGCACGATCTCGGTGGCGGCCTGACCGAAGGCTCGGACGCTTCCGTCTCGCTCCAGCCGCTTGCCGGCATCCACGACACCTATGAGCGGGCCTGGGCAGCGGATTGGCTCGTCGCCATCCTCATGCGGGAAGGCGTCACCATCACGCCGGAAGCCAAGGAGCATATCTGGACGGCGCTGACGTCGCTGAGCACGGCGCCGGTCGAGGAACGCACCATCACCGGGCTGTGCGTTCTGTTGCAATCCAACAGCCTGAAGCAAGCCCTTCGGCCCTACTGCGTCGGCGGTGCTTACGGCCGGCTGCTCGACGCGGAAGCCGAATATCTCGGCTCCGCCGACGTCCAGGCGTTCGAGATCGAGGGGCTTGTCGGCACGGGCGCGGCGCCGGCGGTGCTGGCTTATCTTTTTCATCGCATCGGCGATCGCCTCGATGGGCGGCCGACGCTGCTCATCATCGATGAGGGCTGGCTTGCGCTCGACGACGAGGGGTTCGCCGGCCAGCTCCGCGAATGGCTCAAGACGCTGCGCAAGAAGAACACCTCCGTTATCTTCGCTACGCAGTCGCTGTCCGACATCGCCAGTTCGGCCATCGCGGCGGCGATCATCGAAAGCTGCCCGACACGGCTGCTGTTGCCGAACGAGCGGGCGATCGAGCCGCAGATCACCGCCATCTATCGTCGCTTCGGCCTCAACGACCGCCAGATCGAAATCCTCGCGCGCGCAACGCCCAAGCAGGATTATTACTGCCAGTCGCGGCGTGGCAACCGCCTGTTCGAGCTGGGCCTGTCCGAAGTCGGCCTCGCACTCTGCGCCGCGTCTTCCAAGTCCGACCAGGCGCTGATTGCCAACATCGTCGCCGAGCACGGCCGCGACGGCTTTCTGGAAGCGTGGCTCAACGCCCGCGATGTCGGCTGGGCGGTCGATCTCATTCCCAGCCTCACCAATAAGGAGACATTGGCATGA
PROTEIN sequence
Length: 813
MINLAEYRRTASRLADYLPWAALVGPGVVLNKDGSFQRSARFRGPDLDSAVAAELVAVAGRINNAFRRLGSGWSIFVEAQRHEASTYPNSTFPDPASALVDAERKADFEEAGAHFVSSYYLTFLYLPPAEEAARAETWLYEGRERSGVDPHEVMRAFVDRTDRVLALLDGFMPECAWLDDVETLTYLHSCVSLSRHRVRVPETPVYLDALLADQPLTGGLEPRLGDQSLRILTIIGFPTATTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTRIRRQWFAKRKSIAAILKEVMTNEQSVLVDTDAANKAADADMALQELGQDVAGMAYVTATITVWDTEVRLADEKLRLVEKVIQGHDFAAMTETVNAVDAWLGSLPGHAYANVRQPPVSTLNLAHMIPLSAVWAGEGRDEHLRAPALLYGRTEGSTPFRFSLHVGDVGHTLIIGPTGSGKSVLLALMALQFRRYEGSQVFAFDFGGSIRAAALAMGGDWHDLGGGLTEGSDASVSLQPLAGIHDTYERAWAADWLVAILMREGVTITPEAKEHIWTALTSLSTAPVEERTITGLCVLLQSNSLKQALRPYCVGGAYGRLLDAEAEYLGSADVQAFEIEGLVGTGAAPAVLAYLFHRIGDRLDGRPTLLIIDEGWLALDDEGFAGQLREWLKTLRKKNTSVIFATQSLSDIASSAIAAAIIESCPTRLLLPNERAIEPQITAIYRRFGLNDRQIEILARATPKQDYYCQSRRGNRLFELGLSEVGLALCAASSKSDQALIANIVAEHGRDGFLEAWLNARDVGWAVDLIPSLTNKETLA*