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SCNpilot_cont_300_bf_scaffold_1240_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1240_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..228
DNA (228bp) protein (76aa)
inositol-1(or 4)-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol monophosphatase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTM9_9BRAD
Inositol monophosphatase {ECO:0000313|EMBL:EAQ36727.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_1240_curated_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(250..3585)
DNA (3336bp) protein (1112aa)
Hydrophobe/amphiphile efflux-1 HAE1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHN0_NITHX
Hydrophobe/amphiphile efflux-1 HAE1 {ECO:0000313|EMBL:ABE64267.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
hydrophobe/amphiphile efflux-1 HAE1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_cont_300_bf_scaffold_1240_curated_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3592..4794)
DNA (1203bp) protein (401aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHM9_NITHX
secretion protein HlyD; K03585 membrane fusion protein
Secretion protein HlyD {ECO:0000313|EMBL:ABE64268.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1240_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5201..6370
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHM7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64270.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1240_curated_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6383..7411
DNA (1029bp) protein (343aa)
Flagellar motor protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTM3_9BRAD
Flagellar motor protein {ECO:0000313|EMBL:EAQ36733.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein; K02557 chemotaxis protein MotB
SCNpilot_cont_300_bf_scaffold_1240_curated_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7442..8023
DNA (582bp) protein (194aa)
N-acetyltransferase; K03827 putative acetyltransferase [EC:2.3.1.-]
GCN5-related N-acetyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTM4_9BRAD
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EAQ36734.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_1240_curated_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8060..9970)
DNA (1911bp) protein (637aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTM0_9BRAD
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:EAQ36735.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ABC transporter ATP-binding/permease; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_300_bf_scaffold_1240_curated_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10108..10335
DNA (228bp) protein (76aa)
50S ribosomal protein L31 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RL31_NITHX
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1240_curated_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10439..11176)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIV0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29011.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1240_curated_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11542..12063)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHM2_NITHX
hypothetical protein; K13592 regulator of CtrA degradation
Uncharacterized protein {ECO:0000313|EMBL:EAQ36737.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_1240_curated_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12469..12663)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTL7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36738.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1240_curated_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12795..13817
DNA (1023bp) protein (341aa)
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHM0_NITHX
zinc-binding alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABE64277.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1240_curated_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13973..16984
DNA (3012bp) protein (1004aa)
Multi-sensor diguanylate cyclase/phophodiesterase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTL6_9BRAD
Multi-sensor diguanylate cyclase/phophodiesterase {ECO:0000313|EMBL:EAQ36740.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
diguanylate cyclase/phosphodiesterase
SCNpilot_cont_300_bf_scaffold_1240_curated_14
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17194..17844)
DNA (651bp) protein (217aa)
UPF0301 protein NB311A_15777 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTL4_9BRAD
UPF0301 protein NB311A_15777 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein; K07735 putative transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1240_curated_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17982..18824
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHL7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64280.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1240_curated_16
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19247..20581
DNA (1335bp) protein (445aa)
Polysaccharide biosynthesis protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNY4_NITWN
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ABA06007.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_1240_curated_17
unknown

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comp(20449..20763)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1240_curated_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20808..21596)
DNA (789bp) protein (263aa)
3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHL4_NITHX
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:ABE64283.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 18 items

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