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SCNpilot_cont_300_bf_scaffold_583_curated

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_583_curated_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370..609)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037F36DF
hypothetical protein
Blr1666 protein {ECO:0000313|EMBL:BAC46931.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_583_curated_2
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(635..6535)
DNA (5901bp) protein (1967aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M6Y0_METRJ
putative DNA helicase
Uncharacterized protein {ECO:0000313|EMBL:ACB26639.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_300_bf_scaffold_583_curated_3
unknown

Not on your lists

7106..7279
DNA (174bp) protein (58aa)
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I8E7_9BRAD
SCNpilot_cont_300_bf_scaffold_583_curated_4
unknown

Not on your lists

7758..7877
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_583_curated_5
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8266..8877)
DNA (612bp) protein (204aa)
Methyltransferase type 11 n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6BXY9_SINMB
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEG06801.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
SCNpilot_cont_300_bf_scaffold_583_curated_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8889..9185)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGA2_9BRAD
Cytochrome c2 iso-2 {ECO:0000313|EMBL:CEG06642.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
cytochrome c, class I; K08738 cytochrome c
SCNpilot_cont_300_bf_scaffold_583_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9182..9511)
DNA (330bp) protein (110aa)
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4M3_9BRAD
Cytochrome C {ECO:0000313|EMBL:KIZ37576.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c, class I; K08738 cytochrome c
SCNpilot_cont_300_bf_scaffold_583_curated_8
unknown

Not on your lists

comp(9593..9685)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_583_curated_9
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9729..12914)
DNA (3186bp) protein (1062aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSU1_9BRAD
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:EIG62847.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
CusA; cation efflux system protein cusA
SCNpilot_cont_300_bf_scaffold_583_curated_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12911..14362)
DNA (1452bp) protein (484aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V745_9BRAD
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFI51055.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
secretion protein HlyD
SCNpilot_cont_300_bf_scaffold_583_curated_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14359..14766)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V744_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51054.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_583_curated_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14869..15234)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V743_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51053.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_300_bf_scaffold_583_curated_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15479..17614)
DNA (2136bp) protein (712aa)
cadA3; cadmium-translocating P-type ATPase (EC:3.6.3.3); K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Cadmium-translocating P-type ATPase n=2 Tax=Oligotropha carboxidovorans RepID=B6J9V0_OLICO
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase {ECO:0000313|EMBL:AEI05211.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_583_curated_14
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17683..18090
DNA (408bp) protein (136aa)
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMW1_NITWN
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABA06380.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_583_curated_15
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18368..18670)
DNA (303bp) protein (101aa)
NADPH-dependent FMN reductase n=1 Tax=Methyloferula stellata RepID=UPI0003819284
Arsenical resistance protein ArsH {ECO:0000313|EMBL:EIG62883.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
NADPH-dependent FMN reductase; K11811 arsenical resistance protein ArsH
SCNpilot_cont_300_bf_scaffold_583_curated_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20510..21289
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003734D8A
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ABE37258.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_300_bf_scaffold_583_curated_17
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21524..23614
DNA (2091bp) protein (697aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000362428B
AAA ATPase central domain protein {ECO:0000313|EMBL:EHP95094.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_583_curated_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23669..23932
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DB6588
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEG10163.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_300_bf_scaffold_583_curated_19
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25263..25973
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CHG4_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX23248.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_300_bf_scaffold_583_curated_20
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25970..28159
DNA (2190bp) protein (730aa)
Transposase-like Mu n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8A9_STAND
transposase-like Mu
Transposase-like Mu {ECO:0000313|EMBL:ADH88582.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_583_curated_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28162..29256
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07NW6_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ06368.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_300_bf_scaffold_583_curated_22
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29253..31091
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YLM1_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR03026.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_583_curated_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31359..31574
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N5J5_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE28420.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_300_bf_scaffold_583_curated_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32162..33379
DNA (1218bp) protein (406aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q7R2_RHOPT
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:ACF01828.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_300_bf_scaffold_583_curated_25
unknown

Not on your lists

33609..33713
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 25 items

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