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SCNpilot_cont_300_bf_scaffold_579_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_579_curated_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163..1590)
DNA (1428bp) protein (476aa)
hemolysin secretion protein D n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037DC91A
Putative type I secretion system membrane fusion protein (MFP) {ECO:0000313|EMBL:KGJ66779.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hlyD; hemolysin secretion protein D; K11003 hemolysin D rbh
SCNpilot_cont_300_bf_scaffold_579_curated_2
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1577..4321)
DNA (2745bp) protein (915aa)
UPI0003CE91E5 related cluster n=1 Tax=unknown RepID=UPI0003CE91E5
Peptidase C39 {ECO:0000313|EMBL:ESY82435.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
HlyB/MsbA family ABC transporter; K11004 ATP-binding cassette, subfamily B, bacterial HlyB/CyaB rbh
SCNpilot_cont_300_bf_scaffold_579_curated_3
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4440..6359)
DNA (1920bp) protein (640aa)
UPI0003CF94B5 related cluster n=1 Tax=unknown RepID=UPI0003CF94B5
Uncharacterized protein {ECO:0000313|EMBL:ESY82520.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_579_curated_4
unknown

Not on your lists

comp(6725..6850)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_579_curated_5
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6935..8665
DNA (1731bp) protein (577aa)
UPI0003CEE996 related cluster n=1 Tax=unknown RepID=UPI0003CEE996
Uncharacterized protein {ECO:0000313|EMBL:ESY82528.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
polysaccharide export protein
SCNpilot_cont_300_bf_scaffold_579_curated_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9690..11021)
DNA (1332bp) protein (444aa)
UPI0003CF5BAB related cluster n=1 Tax=unknown RepID=UPI0003CF5BAB
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDX43224.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
polysaccharide biosynthesis protein
SCNpilot_cont_300_bf_scaffold_579_curated_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11012..12289)
DNA (1278bp) protein (426aa)
Glycosyl transferase group 1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHF0_METNO
Glycosyl transferase group 1 {ECO:0000313|EMBL:CDX43225.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
group 1 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_579_curated_8
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12310..13068)
DNA (759bp) protein (253aa)
UPI0003CE9EA7 related cluster n=1 Tax=unknown RepID=UPI0003CE9EA7
Uncharacterized protein {ECO:0000313|EMBL:CDX43227.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_579_curated_9
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13055..15037)
DNA (1983bp) protein (661aa)
UPI0003CF2E6F related cluster n=1 Tax=unknown RepID=UPI0003CF2E6F
Uncharacterized protein {ECO:0000313|EMBL:ESY82522.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
putative transmembrane protein
SCNpilot_cont_300_bf_scaffold_579_curated_10
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15028..16182)
DNA (1155bp) protein (385aa)
UPI0003CE90CA related cluster n=1 Tax=unknown RepID=UPI0003CE90CA
Glycosyl transferase family 1 {ECO:0000313|EMBL:ESY82439.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
group 1 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_579_curated_11
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16260..17057)
DNA (798bp) protein (266aa)
UPI0003CF145E related cluster n=1 Tax=unknown RepID=UPI0003CF145E
Glycosyl transferase {ECO:0000313|EMBL:ESY82438.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
family 2 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_579_curated_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17054..18313)
DNA (1260bp) protein (420aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHF5_METNO
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CDX43239.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_cont_300_bf_scaffold_579_curated_13
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18636..19844
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000367A149
Uncharacterized protein {ECO:0000313|EMBL:ESY64293.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_579_curated_14
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19992..21569)
DNA (1578bp) protein (526aa)
UPI0003CEEE3F related cluster n=1 Tax=unknown RepID=UPI0003CEEE3F
Uncharacterized protein {ECO:0000313|EMBL:CDX43245.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_579_curated_15
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22166..23278
DNA (1113bp) protein (371aa)
UPI0003CE5227 related cluster n=1 Tax=unknown RepID=UPI0003CE5227
Beta-mannosidase {ECO:0000313|EMBL:ESY82437.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
glycoside hydrolase family protein
SCNpilot_cont_300_bf_scaffold_579_curated_16
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23275..24273
DNA (999bp) protein (333aa)
UPI0003CF32F6 related cluster n=1 Tax=unknown RepID=UPI0003CF32F6
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:ESY82436.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
family 2 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_579_curated_17
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24527..25570
DNA (1044bp) protein (348aa)
galE; UDP-galactose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-galactose 4-epimerase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IH20_AZOC5
UDP-galactose 4-epimerase {ECO:0000313|EMBL:BAF86161.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_579_curated_18
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26246..26536)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVG3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36022.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_579_curated_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26795..26998
DNA (204bp) protein (68aa)
Stress response CbsD-like protein n=2 Tax=Rhizobium etli RepID=S5SHR4_RHIET
hypothetical protein
Stress response CbsD-like protein {ECO:0000313|EMBL:AGS21652.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_300_bf_scaffold_579_curated_20
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27123..27479
DNA (357bp) protein (119aa)
Blr7651 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CZ4_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ71291.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_300_bf_scaffold_579_curated_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27525..28025
DNA (501bp) protein (167aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG95_NITHX
pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding {ECO:0000313|EMBL:ABE64752.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_579_curated_22
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28182..29234
DNA (1053bp) protein (351aa)
Naringenin-chalcone synthase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTW0_9BRAD
Naringenin-chalcone synthase {ECO:0000313|EMBL:EAQ36647.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
chalcone and stilbene synthases-like
SCNpilot_cont_300_bf_scaffold_579_curated_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29231..29752
DNA (522bp) protein (174aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG97_NITHX
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ABE64750.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_579_curated_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29933..31486)
DNA (1554bp) protein (518aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB4_NITHX
RND efflux system, outer membrane lipoprotein, NodT
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ABE64033.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_579_curated_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31525..34674)
DNA (3150bp) protein (1050aa)
Heavy metal efflux pump CzcA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB5_NITHX
heavy metal efflux pump CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABE64032.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_579_curated_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34694..35950)
DNA (1257bp) protein (419aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB6_NITHX
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
Secretion protein HlyD {ECO:0000313|EMBL:ABE64031.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_579_curated_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36262..36936
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB7_NITHX
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABE64030.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_579_curated_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37098..38483
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB8_NITHX
sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_579_curated_29
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38485..39558)
DNA (1074bp) protein (358aa)
NADPH-dependent FMN reductase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000366D7FC
Multimeric flavodoxin WrbA {ECO:0000313|EMBL:EHR03933.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_579_curated_30
unknown

Not on your lists

comp(39506..39631)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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