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SCNpilot_cont_300_bf_scaffold_675_curated

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_675_curated_1
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(291..1319)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QR37_METSZ
PerM protein {ECO:0000313|EMBL:BAQ45955.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_675_curated_2
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1344..1784)
DNA (441bp) protein (147aa)
Calcium/proton exchanger Cax n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YI71_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDS54013.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
chaA; Cation exchanger; K07300 Ca2+:H+ antiporter
SCNpilot_cont_300_bf_scaffold_675_curated_3
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1753..2412)
DNA (660bp) protein (220aa)
Calcium/proton exchanger Cax n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YI71_9BRAD
Calcium/proton exchanger Cax {ECO:0000313|EMBL:EHR01803.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
cation exchanger; K07300 Ca2+:H+ antiporter
SCNpilot_cont_300_bf_scaffold_675_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2418..3983)
DNA (1566bp) protein (522aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG30_NITHX
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABE64817.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4054..4710)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG31_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64816.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4703..5704)
DNA (1002bp) protein (334aa)
Putative membrane protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG32_NITHX
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABE64815.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5714..6808)
DNA (1095bp) protein (365aa)
Mandelate racemase/muconate lactonizing enzyme n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG33_NITHX
mandelate racemase/muconate lactonizing enzyme
Mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:ABE64814.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6810..8594)
DNA (1785bp) protein (595aa)
thiamine pyrophosphate protein (EC:1.2.2.2); K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
Thiamine pyrophosphate enzyme-like TPP binding region n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG34_NITHX
Thiamine pyrophosphate enzyme-like TPP binding region {ECO:0000313|EMBL:ABE64813.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9097..9474
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG35_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64812.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9527..10183
DNA (657bp) protein (219aa)
Chaperone protein HtpG n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG36_NITHX
chaperone protein HtpG
Chaperone protein HtpG {ECO:0000313|EMBL:ABE64811.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10180..13026
DNA (2847bp) protein (949aa)
4Fe-4S ferredoxin, iron-sulfur binding; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-]
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG37_NITHX
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:ABE64810.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13023..14411
DNA (1389bp) protein (463aa)
polysulphide reductase, NrfD; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-]
Polysulphide reductase, NrfD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG38_NITHX
Polysulphide reductase, NrfD {ECO:0000313|EMBL:ABE64809.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14408..14932
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG39_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64808.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14929..15450
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG40_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64807.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15447..16493
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG41_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64806.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16483..16875
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG42_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64805.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16872..17531
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG43_NITHX
hypothetical protein; K07152
Uncharacterized protein {ECO:0000313|EMBL:ABE64804.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17531..18475
DNA (945bp) protein (315aa)
cytochrome c oxidase, subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase, subunit II n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG44_NITHX
Cytochrome c oxidase, subunit II {ECO:0000313|EMBL:ABE64803.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18472..20145
DNA (1674bp) protein (558aa)
cytochrome c oxidase, subunit I; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase, subunit I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG45_NITHX
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ABE64802.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20142..20777
DNA (636bp) protein (212aa)
cytochrome c oxidase, subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase, subunit III n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG46_NITHX
Cytochrome c oxidase, subunit III {ECO:0000313|EMBL:ABE64801.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20774..21115
DNA (342bp) protein (114aa)
Caa(3)-type oxidase, subunit IV; K02277 cytochrome c oxidase subunit IV [EC:1.9.3.1]
Caa(3)-type oxidase, subunit IV n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG47_NITHX
Caa(3)-type oxidase, subunit IV {ECO:0000313|EMBL:ABE64800.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21135..22130
DNA (996bp) protein (332aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG48_NITHX
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE64799.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22194..24020
DNA (1827bp) protein (609aa)
Glycoside hydrolase 15-related n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG49_NITHX
glycoside hydrolase 15-related
Glycoside hydrolase 15-related {ECO:0000313|EMBL:ABE64798.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_675_curated_24
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24138..26303)
DNA (2166bp) protein (722aa)
Amylo-alpha-16-glucosidase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9M6_MESOW
Amylo-alpha-16-glucosidase
Amylo-alpha-16-glucosidase {ECO:0000313|EMBL:AEH88752.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_300_bf_scaffold_675_curated_25
unknown

Not on your lists

comp(26736..26966)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_675_curated_26
unknown

Not on your lists

27630..27842
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_675_curated_27
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27947..28168)
DNA (222bp) protein (74aa)
Putative ATP-dependent DNA ligase protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUP3_9BRAD
Putative ATP-dependent DNA ligase protein {ECO:0000313|EMBL:EAQ36298.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ATP dependent DNA ligase
SCNpilot_cont_300_bf_scaffold_675_curated_28
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28410..28925)
DNA (516bp) protein (172aa)
Putative ATP-dependent DNA ligase protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUP3_9BRAD
Putative ATP-dependent DNA ligase protein {ECO:0000313|EMBL:EAQ36298.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ATP dependent DNA ligase
Displaying 28 items

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