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SCNpilot_cont_300_bf_scaffold_499_curated

Search features with annotation key words

Displaying items 31-60 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_499_curated_31
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28366..29973)
DNA (1608bp) protein (536aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
cytochrome C oxidase subunit I n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000301F116
Putative cytochrome c oxidase subunit I {ECO:0000313|EMBL:GAO38475.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCNpilot_cont_300_bf_scaffold_499_curated_32
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29970..30911)
DNA (942bp) protein (314aa)
Cytochrome c oxidase, subunit II n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKM9_TISMK
Putative cytochrome c oxidase subunit II {ECO:0000313|EMBL:GAO38474.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ctaC; cytochrome c oxidase subunit II
SCNpilot_cont_300_bf_scaffold_499_curated_33
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(30951..31304)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI0003738764
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_cont_300_bf_scaffold_499_curated_34
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31418..32074
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HM38_PSEST
Uncharacterized protein {ECO:0000313|EMBL:GAO38471.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
chaperone protein HtpG
SCNpilot_cont_300_bf_scaffold_499_curated_35
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32083..34980
DNA (2898bp) protein (966aa)
molybdopterin oxidoreductase, iron-sulfur binding subunit; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-]
Molybdopterin oxidoreductase, iron-sulfur binding subunit n=1 Tax=alpha proteobacterium JLT2015 RepID=M2SGE4_9PROT
Molybdopterin oxidoreductase, iron-sulfur binding subunit {ECO:0000313|EMBL:EMD84445.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
SCNpilot_cont_300_bf_scaffold_499_curated_36
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34977..36332
DNA (1356bp) protein (452aa)
Molybdopterin oxidoreductase n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TRP1_9PROT
Polysulphide reductase NrfD family protein {ECO:0000313|EMBL:GAO38469.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
polysulfide reductase NrfD
SCNpilot_cont_300_bf_scaffold_499_curated_37
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36325..36855
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CVC3_TRURR
Uncharacterized protein {ECO:0000313|EMBL:GAO38468.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_499_curated_38
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36852..37379
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6E0_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX56380.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_499_curated_39
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37376..38461
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHV4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAO38466.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_499_curated_40
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38409..39227)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003684CC0
hypothetical protein; K07152
Uncharacterized protein {ECO:0000313|EMBL:ACA20105.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_300_bf_scaffold_499_curated_41
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39313..40482)
DNA (1170bp) protein (390aa)
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNK4_NITWN
SCNpilot_cont_300_bf_scaffold_499_curated_42
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40582..43485)
DNA (2904bp) protein (968aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Ribonucleoside-diphosphate reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHA6_NITHX
SCNpilot_cont_300_bf_scaffold_499_curated_43
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43996..44664
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHA7_NITHX
hypothetical protein; K09765 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64390.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_44
unknown

Not on your lists

comp(44747..44926)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_499_curated_45
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45040..47376
DNA (2337bp) protein (779aa)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000255|HAMAP-Rule:MF_00172}; EC=2.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00172};; Cobalamin-independent methionine synthase {ECO:0000255|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000255|HAMAP-Rule:MF_00172}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=METE_NITWN rbh
SCNpilot_cont_300_bf_scaffold_499_curated_46
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47817..48092)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SU69_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA04172.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_499_curated_47
unknown

Not on your lists

comp(48213..48434)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_499_curated_48
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48967..50589
DNA (1623bp) protein (541aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHY3_NITHX
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABE64164.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_49
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51443..52048
DNA (606bp) protein (202aa)
manganese and iron superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Superoxide dismutase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SU66_NITWN
SCNpilot_cont_300_bf_scaffold_499_curated_50
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52224..52598
DNA (375bp) protein (125aa)
Putative fluoride ion transporter CrcB 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=CRCB2_NITHX
camphor resistance protein CrcB; K06199 CrcB protein
Putative fluoride ion transporter CrcB 2 {ECO:0000255|HAMAP-Rule:MF_00454}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_51
unknown

Not on your lists

comp(52676..52807)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_499_curated_52
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52953..53708
DNA (756bp) protein (252aa)
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHY9_NITHX
ABC transporter; K02074 zinc/manganese transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ABE64158.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_53
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53716..54585
DNA (870bp) protein (290aa)
ABC-3 protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHZ0_NITHX
hypothetical protein; K02075 zinc/manganese transport system permease protein
ABC-3 protein {ECO:0000313|EMBL:ABE64157.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_54
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54585..55535
DNA (951bp) protein (317aa)
Periplasmic solute binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHZ1_NITHX
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ABE64156.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_55
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55677..56771
DNA (1095bp) protein (365aa)
Cobalamin synthesis protein, P47K n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHZ2_NITHX
cobalamin synthesis protein, P47K
Cobalamin synthesis protein, P47K {ECO:0000313|EMBL:ABE64155.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_56
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56771..57787
DNA (1017bp) protein (339aa)
WD-40 repeat-containing protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHZ3_NITHX
hypothetical protein
WD-40 repeat-containing protein {ECO:0000313|EMBL:ABE64154.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_57
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58553..59986)
DNA (1434bp) protein (478aa)
homospermidine synthase (EC:2.5.1.44); K00808 homospermidine synthase [EC:2.5.1.44]
Homospermidine synthase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXW7_9BRAD
Homospermidine synthase {ECO:0000313|EMBL:EAQ35171.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_499_curated_58
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60125..61108)
DNA (984bp) protein (328aa)
Cation diffusion facilitator family transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHZ5_NITHX
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ABE64152.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_59
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61300..61695)
DNA (396bp) protein (132aa)
GreA/GreB family elongation factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHZ6_NITHX
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
GreA/GreB family elongation factor {ECO:0000313|EMBL:ABE64151.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_499_curated_60
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62052..62645)
DNA (594bp) protein (198aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHZ7_NITHX
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABE64150.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying items 31-60 of 61 in total

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