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SCNpilot_cont_300_bf_scaffold_687_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_687_curated_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(112..2205)
DNA (2094bp) protein (698aa)
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ABE61253.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABE61253.1};; EC=4.2.1.17 {ECO:0000313|EMBL:ABE61253.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR94_NITHX
SCNpilot_cont_300_bf_scaffold_687_curated_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2635..3432
DNA (798bp) protein (266aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR95_NITHX
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABE61252.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3429..4142
DNA (714bp) protein (238aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR96_NITHX
ABC transporter
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABE61251.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4146..5024
DNA (879bp) protein (293aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRA1_NITHX
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABE61246.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5021..6040
DNA (1020bp) protein (340aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRA0_NITHX
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABE61247.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6051..7283
DNA (1233bp) protein (411aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR99_NITHX
extracellular ligand-binding receptor
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABE61248.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7419..8615)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR98_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61249.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_8
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8734..9021)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T0H0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD99947.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_687_curated_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9287..9970
DNA (684bp) protein (228aa)
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRA5_NITHX
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ABE61242.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9967..12426
DNA (2460bp) protein (820aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRA6_NITHX
Uncharacterized protein {ECO:0000313|EMBL:ABE61241.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_687_curated_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12491..13501
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRA7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61240.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13700..14638
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPG1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61886.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14848..15930
DNA (1083bp) protein (361aa)
Luciferase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPN6_NITHX
luciferase-like protein
Luciferase-like protein {ECO:0000313|EMBL:ABE61811.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15986..18352)
DNA (2367bp) protein (789aa)
TonB-dependent receptor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPN7_NITHX
TonB-dependent receptor {ECO:0000313|EMBL:ABE61810.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_300_bf_scaffold_687_curated_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18742..19710
DNA (969bp) protein (323aa)
Periplasmic binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPN8_NITHX
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABE61809.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19733..20548)
DNA (816bp) protein (272aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPN9_NITHX
ABC transporter related protein {ECO:0000313|EMBL:ABE61808.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20545..21546)
DNA (1002bp) protein (334aa)
Transport system permease protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPP0_NITHX
transport system permease; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ABE61807.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21875..23653)
DNA (1779bp) protein (593aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KA52_NITWC
Thiamine pyrophosphate protein {ECO:0000313|EMBL:EWY39052.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_cont_300_bf_scaffold_687_curated_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23784..23957)
DNA (174bp) protein (58aa)
UPF0391 membrane protein CSIRO_2906 n=2 Tax=Bradyrhizobiaceae RepID=F7QMV1_9BRAD
UPF0391 membrane protein HMPREF9696_00889 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_687_curated_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24304..25407
DNA (1104bp) protein (368aa)
Ribonuclease BN, putative n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGP6_NITHX
ribonuclease BN; K07058 membrane protein
Ribonuclease BN, putative {ECO:0000313|EMBL:ABE64601.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_21
unknown

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comp(25457..25834)
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_687_curated_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26241..27899
DNA (1659bp) protein (553aa)
Signal transduction histidine kinase {ECO:0000313|EMBL:ABE64829.1}; EC=2.7.3.- {ECO:0000313|EMBL:ABE64829.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG18_NITHX
signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_687_curated_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28058..28258)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG21_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64826.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_687_curated_24
unknown

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29273..29335
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 24 items

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