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SCNpilot_cont_300_bf_scaffold_598_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_598_curated_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..999
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NT64_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29418.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_598_curated_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1079..1813
DNA (735bp) protein (245aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP98_NITHX
Glutathione S-transferase-like protein {ECO:0000313|EMBL:ABE61949.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_3
unknown

Not on your lists

1954..2130
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PER3_9BRAD
SCNpilot_cont_300_bf_scaffold_598_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2224..3381
DNA (1158bp) protein (386aa)
Glucose sorbosone dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP99_NITHX
glucose sorbosone dehydrogenase
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:ABE61948.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3406..3969)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61947.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4184..4390)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61946.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4401..5708)
DNA (1308bp) protein (436aa)
isocitrate lyase; K01637 isocitrate lyase [EC:4.1.3.1]
Isocitrate lyase {ECO:0000313|EMBL:ABE61945.1}; EC=4.1.3.1 {ECO:0000313|EMBL:ABE61945.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Isocitrate lyase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA2_NITHX
SCNpilot_cont_300_bf_scaffold_598_curated_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5877..7328
DNA (1452bp) protein (484aa)
Transcriptional regulator, XRE family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA3_NITHX
XRE family transcriptional regulator; K07110
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABE61944.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7438..8859
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VPE7_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU44807.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_300_bf_scaffold_598_curated_10
unknown

Not on your lists

comp(8874..9011)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_598_curated_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9008..9574)
DNA (567bp) protein (189aa)
Cytochrome c, class I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA5_NITHX
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABE61942.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9561..10961)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGF4_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29577.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
twin-arginine translocation pathway signal
SCNpilot_cont_300_bf_scaffold_598_curated_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11328..11831
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA8_NITHX
hypothetical protein; K09983 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61939.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12142..13695)
DNA (1554bp) protein (518aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Homodimeric glycerol 3-phosphate dehydrogenase (Quinone) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA9_NITHX
SCNpilot_cont_300_bf_scaffold_598_curated_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13882..14715)
DNA (834bp) protein (278aa)
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQR6_9BRAD
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:ERF86315.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
SCNpilot_cont_300_bf_scaffold_598_curated_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14907..15137)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61937.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15351..15800)
DNA (450bp) protein (150aa)
thioesterase superfamily protein; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Thioesterase superfamily n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB1_NITHX
Thioesterase superfamily {ECO:0000313|EMBL:ABE61936.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15811..17901)
DNA (2091bp) protein (697aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABE61935.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABE61935.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-hydroxyacyl-CoA dehydrogenase; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB2_NITHX
SCNpilot_cont_300_bf_scaffold_598_curated_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17909..19192)
DNA (1284bp) protein (428aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:ABE61934.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ABE61934.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Acetyl-CoA C-acyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB3_NITHX
SCNpilot_cont_300_bf_scaffold_598_curated_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19192..21456)
DNA (2265bp) protein (755aa)
fadE; acyl-CoA dehydrogenase (EC:1.3.99.3); K06445 acyl-CoA dehydrogenase [EC:1.3.99.-]
Acyl-CoA dehydrogenase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB4_NITHX
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:ABE61933.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21803..22417)
DNA (615bp) protein (205aa)
Transcriptional regulator, TetR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB6_NITHX
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABE61931.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22436..25570)
DNA (3135bp) protein (1045aa)
Acriflavin resistance protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB7_NITHX
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABE61930.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25654..26760)
DNA (1107bp) protein (369aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB8_NITHX
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABE61929.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27238..29334
DNA (2097bp) protein (699aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB9_NITHX
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABE61928.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_25
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29534..29749
DNA (216bp) protein (72aa)
CsbD-like protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW23_9BRAD
CsbD-like protein {ECO:0000313|EMBL:EAQ35817.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
CsbD-like protein
SCNpilot_cont_300_bf_scaffold_598_curated_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29872..30639
DNA (768bp) protein (256aa)
UPF0176 protein Nham_1078 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y1078_NITHX rbh
rhodanese-like protein; K07146 UPF0176 protein
UPF0176 protein Nham_1078 {ECO:0000255|HAMAP-Rule:MF_00469}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30632..30844
DNA (213bp) protein (71aa)
Protein SlyX homolog n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=SLYX_NITHX
SlyX family protein; K03745 SlyX protein
Protein SlyX homolog {ECO:0000255|HAMAP-Rule:MF_00715}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31033..32349
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPC3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61924.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_598_curated_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32405..33391)
DNA (987bp) protein (329aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase {ECO:0000313|EMBL:ABE61923.1}; EC=1.13.12.16 {ECO:0000313|EMBL:ABE61923.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
2-nitropropane dioxygenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPC4_NITHX
SCNpilot_cont_300_bf_scaffold_598_curated_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33718..34344
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPC5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61922.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying items 1-30 of 33 in total

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