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SCNpilot_cont_300_bf_scaffold_864_curated

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_864_curated_1
unknown

Not on your lists

comp(351..491)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_864_curated_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(551..1411)
DNA (861bp) protein (287aa)
Molybdenum ABC transporter, periplasmic binding protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SU97_NITWN
molybdate ABC transporter periplasmic molybdate-binding protein
Molybdenum ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:ABA04144.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_864_curated_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1408..3549)
DNA (2142bp) protein (714aa)
TonB-dependent siderophore receptor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQ68_NITHX
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABE61629.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_864_curated_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4348..5046
DNA (699bp) protein (233aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ABC transporter, ATPase subunit n=2 Tax=Nitrobacter sp. Nb-311A RepID=A3X069_9BRAD
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB
SCNpilot_cont_300_bf_scaffold_864_curated_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5053..5403
DNA (351bp) protein (117aa)
Outer membrane transport energization protein ExbD n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUS1_NITWN
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Outer membrane transport energization protein ExbD {ECO:0000313|EMBL:ABA03970.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_864_curated_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5403..5537
DNA (135bp) protein (45aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSV5_9BRAD
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EAQ36899.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
SCNpilot_cont_300_bf_scaffold_864_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5534..6337
DNA (804bp) protein (268aa)
Outer membrane transport energization protein TonB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQ65_NITHX
TonB-like protein; K03832 periplasmic protein TonB
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABE61632.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_864_curated_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6747..7268
DNA (522bp) protein (174aa)
Putative glycosyl transferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXT5_9BRAD
Putative glycosyl transferase {ECO:0000313|EMBL:EAQ35206.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_864_curated_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7290..8831
DNA (1542bp) protein (514aa)
Putative bifunctional glycosyltransferase, forming alpha-glycosyland beta-glycosyl linkages protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXT4_9BRAD
Putative bifunctional glycosyltransferase, forming alpha-glycosyland beta-glycosyl linkages protein {ECO:0000313|EMBL:EAQ35205.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
expE2; glycosyltransferase
SCNpilot_cont_300_bf_scaffold_864_curated_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8828..10156
DNA (1329bp) protein (443aa)
gt4C; glycosyl transferase family protein (EC:2.4.1.-)
Putative glycosyltransferase, forming alpha glycosyl linkages protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXT3_9BRAD
Putative glycosyltransferase, forming alpha glycosyl linkages protein {ECO:0000313|EMBL:EAQ35204.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_864_curated_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10209..11306
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXT2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35203.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_864_curated_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11303..11773
DNA (471bp) protein (157aa)
tagD; glycerol-3-phosphate cytidylyltransferase TagD (EC:2.7.7.39)
Putative cytidylyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXT7_9BRAD
Putative cytidylyltransferase {ECO:0000313|EMBL:EAQ35202.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_864_curated_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11825..12853
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXU1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35201.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_864_curated_14
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12928..13779
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXU0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35200.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_864_curated_15
unknown

Not on your lists

comp(13864..13965)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_864_curated_16
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14138..15610
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036B475D
Uncharacterized protein {ECO:0000313|EMBL:EQB15229.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
ceramide glucosyltransferase
SCNpilot_cont_300_bf_scaffold_864_curated_17
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15668..16762)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036B34F0
Uncharacterized protein {ECO:0000313|EMBL:EAQ36848.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
SCNpilot_cont_300_bf_scaffold_864_curated_18
unknown

Not on your lists

comp(17122..17385)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_864_curated_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17486..18667
DNA (1182bp) protein (394aa)
Molybdopterin binding domain n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIS6_NITHX
molybdopterin binding domain-containing protein
Molybdopterin binding domain {ECO:0000313|EMBL:ABE63871.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_864_curated_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18645..20630
DNA (1986bp) protein (662aa)
molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]; K07219 putative molybdopterin biosynthesis protein
Molybdopterin molybdochelatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIS7_NITHX
Molybdopterin molybdochelatase {ECO:0000313|EMBL:ABE63870.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_864_curated_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20634..21263)
DNA (630bp) protein (210aa)
mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77]
Molybdenum cofactor guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000255|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000255|HAMAP-Rule:MF_00316}; Short=MGD synthase {ECO:0000255|HAMAP-R
Molybdenum cofactor guanylyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MOBA_NITHX rbh
SCNpilot_cont_300_bf_scaffold_864_curated_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21253..22140)
DNA (888bp) protein (296aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIS9_NITHX
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein
Protein FdhD homolog {ECO:0000256|SAAS:SAAS00093832}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_864_curated_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22314..22841
DNA (528bp) protein (176aa)
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIT0_NITHX
molybdopterin-guanine dinucleotide biosynthesis protein B; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB {ECO:0000313|EMBL:ABE63867.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_864_curated_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22851..24107
DNA (1257bp) protein (419aa)
MoeA-like domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Molybdopterin molybdochelatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIT1_NITHX
Molybdopterin molybdochelatase {ECO:0000313|EMBL:ABE63866.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_864_curated_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24153..24389
DNA (237bp) protein (79aa)
SirA-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIT2_NITHX
SirA-like protein
SirA-like protein {ECO:0000313|EMBL:ABE63865.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_864_curated_26
unknown

Not on your lists

comp(24639..24761)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAT5_9BRAD
SCNpilot_cont_300_bf_scaffold_864_curated_27
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24921..25745)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRP0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28878.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
extracellular tungstate binding protein; K05772 tungstate transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_864_curated_28
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25766..26491)
DNA (726bp) protein (242aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8C7_9BRAD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EJZ29955.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
ABC transporter ATP-binding protein; K06857 tungstate transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_864_curated_29
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26494..27186)
DNA (693bp) protein (231aa)
ABC-type tungstate transport system, permease protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QK23_9BRAD
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EJZ29956.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
binding-protein-dependent transport system inner membrane protein; K05773 tungstate transport system permease protein
SCNpilot_cont_300_bf_scaffold_864_curated_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27586..28599)
DNA (1014bp) protein (338aa)
Formate dehydrogenase gamma subunit {ECO:0000313|EMBL:ABE63864.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABE63864.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Formate dehydrogenase gamma subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIT3_NITHX
formate dehydrogenase, gamma subunit; K00127 formate dehydrogenase, gamma subunit
Displaying items 1-30 of 44 in total

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