ggKbase home page

SCNpilot_cont_300_bf_scaffold_2547_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2547_curated_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1225)
DNA (1224bp) protein (408aa)
amine oxidase; K00274 monoamine oxidase [EC:1.4.3.4]
Amine oxidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQJ5_NITHX
Amine oxidase {ECO:0000313|EMBL:ABE61502.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_2547_curated_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1185..3839)
DNA (2655bp) protein (885aa)
DNA mismatch repair protein MutS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MUTS_NITHX rbh
DNA mismatch repair protein MutS {ECO:0000255|HAMAP-Rule:MF_00096}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
SCNpilot_cont_300_bf_scaffold_2547_curated_3
unknown

Not on your lists

4656..4781
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2547_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5532..6692)
DNA (1161bp) protein (387aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQJ2_NITHX
secretion protein HlyD; K03543 multidrug resistance protein A
Secretion protein HlyD {ECO:0000313|EMBL:ABE61505.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_2547_curated_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6685..7173)
DNA (489bp) protein (163aa)
Transcriptional regulator, MarR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQJ1_NITHX
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABE61506.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_2547_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7430..7921
DNA (492bp) protein (164aa)
Putative ferric uptake regulator, FUR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQJ0_NITHX
ferric uptake regulator family protein; K09823 Fur family transcriptional regulator, zinc uptake regulator
Putative ferric uptake regulator, FUR family {ECO:0000313|EMBL:ABE61507.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_2547_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8047..8958
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKR0_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42189.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_300_bf_scaffold_2547_curated_8
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9097..10389
DNA (1293bp) protein (431aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000255|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000255|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00159}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=ISPG_NITWN rbh
SCNpilot_cont_300_bf_scaffold_2547_curated_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10543..11880)
DNA (1338bp) protein (446aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI8_NITHX
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family
Sodium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ABE61509.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 9 items

View Taxonomy